Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3471 ATGGCGCATCAAAGAGCCAAATTGCTGCTCCTTCTCTGTGCTCTATGCTATTCTCTCAGCGCCATTGCCGTAAAGAGTTATTACGATATACTTCAAGTGTCGAAAGGTGCATCGGATGATCAGATTAAGAGAGCGTATAGAAAGCTTGCATTGAAGTATCATCCTGATAAGAATCCGGGAAATGAAGAAGCTAATAAGAAATTTGCGGAGATTAGCAATGCATATGAGGTATTGTCGGATAACGAGAAGAGAAATATATATGATAAGTATGGTGAAGAGGGTTTGAAGCAGCATGCCGCTGGTGGAGGAAGAGGTGGTGGAATGAACATGCAGGATATTTTTAACTCTTTCTTTGGCGGGGGATCAATGGAGGAAGAAGAAGAGAAAATTGCAAAAGGTGACGACGTTATTGTTGATTTGGATGCAACCCTTGAAGATTTGTATATGGGTGGCTCCTTGAAGGTTTGGAGGGAGAAAAATGTTGTAAAGCCAGCTCCTGGAAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAGGCAAATTGGGCCTGGCATGTTTCAACAAATGACAGAGCAGGTCTGTGATCAATGTGCTAATGTCAAATACGTAAGGGAGGGATATTTCGTCACTGTTGATATTGAGAAAGGCATGAAAGATGGCCAGGAGGTGCTATTTTATGAGGATGGCGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGTTTCGCATCCGTACTGCACCTCATGAACTTTTCAAAAGGGAAGGCAATGACTTACATACCACCGTCACCATCACGCTGGTTCAAGCTCTTGTTGGTTTTGAGAAGACCATTAAACACCTTGATGAACATTTGGTGGACATAAGCTCGAAGGGAATCACAAATCCGAAGCAAGTGAGGAAGTTCAAAGGGGAGGGTATGCCATTGCATACGAGCACGAAGAAAGGAGATCTTTACGTCACTTTTGAGGTTCTGTTCCCCACCACACTATCGGAGGAACAGAAAACAAAAATAAAATCTATTCTTGGTTAG 1035 0.4251 MAHQRAKLLLLLCALCYSLSAIAVKSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDNEKRNIYDKYGEEGLKQHAAGGGRGGGMNMQDIFNSFFGGGSMEEEEEKIAKGDDVIVDLDATLEDLYMGGSLKVWREKNVVKPAPGKRRCNCRNEVYHRQIGPGMFQQMTEQVCDQCANVKYVREGYFVTVDIEKGMKDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISSKGITNPKQVRKFKGEGMPLHTSTKKGDLYVTFEVLFPTTLSEEQKTKIKSILG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3471 344 Coils Coil 61 81 - -
Mtr7g3471 344 PRINTS DnaJ domain signature 28 46 IPR001623 -
Mtr7g3471 344 PRINTS DnaJ domain signature 46 61 IPR001623 -
Mtr7g3471 344 PRINTS DnaJ domain signature 63 83 IPR001623 -
Mtr7g3471 344 PRINTS DnaJ domain signature 83 102 IPR001623 -
Mtr7g3471 344 Gene3D DnaJ domain 23 127 IPR036869 -
Mtr7g3471 344 SUPERFAMILY Chaperone J-domain 23 122 IPR036869 -
Mtr7g3471 344 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Mtr7g3471 344 Pfam DnaJ domain 27 88 IPR001623 -
Mtr7g3471 344 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 9 343 IPR044713 GO:0006457|GO:0030544
Mtr7g3471 344 CDD DnaJ 27 80 IPR001623 -
Mtr7g3471 344 Gene3D - 250 328 - -
Mtr7g3471 344 Pfam DnaJ C terminal domain 138 328 IPR002939 -
Mtr7g3471 344 SMART dnaj_3 25 83 IPR001623 -
Mtr7g3471 344 CDD DnaJ_C 134 331 - -
Mtr7g3471 344 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Mtr7g3471 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 253 337 IPR008971 GO:0006457|GO:0051082
Mtr7g3471 344 PANTHER BNAC06G43160D PROTEIN 9 343 - -
Mtr7g3471 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 132 251 IPR008971 GO:0006457|GO:0051082
Mtr7g3471 344 Gene3D - 128 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3471 Mtr-Chr7 51694480 51700238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3471 18 90 C2H2 Transcription Factor Family AT1G74250 41.026 4.77e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3471 K09517 - gmx:100799701 599.356