Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3470 ATGGGAAGAGCTCCTTGTTGTGAGAAAGTGGGTTTGAAGAAGGGAAGATGGACCGCAGAGGAGGATGAAATTTTGACCCAATATGTTAAGGCAAATGGGGAAGGTTCTTGGAGGTCATTGCCCAAAAATGCAGGTTTGCTTAGATGTGGTAAAAGTTGTAGATTAAGATGGATTAACTATTTGAGAGCTGATCTCAAAAGGGGAAATATTTCTTCTGAAGAGGAAAGTATCATTATCAAGATGCATGCTTCTTTTGGCAACAGGTGGTCCTTGATTGCAAGTCACTTGCCAGGCAGAACAGACAACGAGATTAAAAACTACTGGAACTCACACTTGAGTAGAAAAGTTTACAGCTTCCGAGGAACATCAACAACAAATTATAATAATATCAAAGAGATAGAGATTCCATCAGAAGAAGGAATCATAGTGGATACACCTCCCAAACGTAAAGGTGGTAGAACTAGTCGATGGGCTATGAAGAAGAACATACGATATATATCCCAAAATGTTTTCCAAAAAAGTGAACCTGCTTCAATTGTTACACTTCCACCCACCCCTACACTAGAGACCGAGAAAATGGTTATGGGCTCAGTAAATGGGCCTTGTTCTAGTGGTGAAAATAATGATATTGAAGCTGATTGTGACCGTATGTTTGGACCAGATCTGAAGGTCATTAATGATGGTGAGTTGTTAGATTTTAATGATATTATCATGGATGCTTTGGAGGTGGAAGAGGTAAAAGAAAGTAATGATGAAAATGTGGTTGTGATTAATGAAATAGTGGTGGGGGACAAAGACACCAACACAAATGGAACAAAGGGCATAGAGAGAAATGATAATGTGACGAATCAATGTTCGAATGAGGAGTTAAATTCTTCGGGTTTGGATGATAACTTGGATTGGGAGAGTGTTATGCCATTGTTGAATCAGAAAGGTCAATCGTTGCTGTGGGAGCAAGATGAAAACATGCTGACTTGGTTGTTGGATGATGATCAATGGGAAAAGGATTTTCAGAGATTTCGAGATATTGATCCTCAAAAGCAAAATGCTTTGGTTTCTTGGTTTTAA 1068 0.3895 MGRAPCCEKVGLKKGRWTAEEDEILTQYVKANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISSEEESIIIKMHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKVYSFRGTSTTNYNNIKEIEIPSEEGIIVDTPPKRKGGRTSRWAMKKNIRYISQNVFQKSEPASIVTLPPTPTLETEKMVMGSVNGPCSSGENNDIEADCDRMFGPDLKVINDGELLDFNDIIMDALEVEEVKESNDENVVVINEIVVGDKDTNTNGTKGIERNDNVTNQCSNEELNSSGLDDNLDWESVMPLLNQKGQSLLWEQDENMLTWLLDDDQWEKDFQRFRDIDPQKQNALVSWF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3470 355 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 334 - -
Mtr7g3470 355 CDD SANT 16 61 IPR001005 -
Mtr7g3470 355 Gene3D - 71 116 - -
Mtr7g3470 355 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr7g3470 355 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr7g3470 355 Gene3D - 11 67 - -
Mtr7g3470 355 SMART sant 66 114 IPR001005 -
Mtr7g3470 355 SMART sant 13 63 IPR001005 -
Mtr7g3470 355 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr7g3470 355 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr7g3470 355 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr7g3470 355 CDD SANT 80 112 IPR001005 -
Mtr7g3470 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr7g3470 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr7g3470 355 PANTHER MYB TRANSCRIPTION FACTOR 2 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3470 Mtr-Chr7 51684212 51687075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3470 1 355 MYB Transcription Factor Family AT2G47460 39.899 1.55e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g3470 Myb_DNA-binding 3.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3470 K09422 - gmx:100788260 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3470 7 51684212 51687075 Mtr1g3169 1 42997470 43001936 PCT