Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3462 ATGGCAACGAGAAATCGAACCGTAGAGTTCAGAAAGTACAGAGACAGCGTCAAAAGCTTACGCACTCCTCTTTCTTCATCAGCTTCTGCTTCTTCCGGTGGTGGTCCTGTCATTGAAATGGTCAACACTTCGCTTCTTCGTACCAATAATGGATCTTCTTATACTCCTCTCAGTACCCATGATCCTGGTCCATCCTCTTCAAGTGATGCATTTACTGTGGGTTTGCCGCCATCTTGGGTGGATGATTCTGAAGAAATAGCTACAAATATACAAAGTGCAAAGGTTAAAATGTCTGAGTTAACAAAAGCTCATGCAAAGGCTTTGATGCCTTCCTTTGGTGATGGTAAAGATGATCAACGTCAGATTGAGACTCTCACCCGGGAAATTACGGCTCTCCTCAGAAAGTCTGAAGTGAGGCTAAAAAGGCTTTCTGCTGGTAGAGGGTCTTCTGAGGATTCTAATGTCAGAAAAAATGTGCAGCGTTCACTTGCTACAGACCTTCAGAACCTGTCAATGGACCTCCGGCGGAAGCAGTCAACATATTTGAAACGTTTACAGCAGCAACAAGAGGGTTACGACGGGATTGACTTGGAAATGAACTTTAAAGGGAGTAGCTCTGGATTTCAGGATGATGAATTCGATGATGTGGGTTTTAGTGAAGAGCAAATGACAAAGCTAAAGAAAAATGAACACATCTCAGCAGAAAGAGAAAGAGAAATTGATCAGGTTGCTAAATCAGTCCACGAACTTGCTCAGATCATGAAGGATCTCTCCGTTCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAGTGTTGCTACAACCGTTGAGGAGGGCTTGAAGCAGTTGCAAAAGGCAGAAAGAACACAGAAAAAAGGAGGGATGATTACATGTGCAACAGTGCTTGTTATCATGTGCTTTGTCATGCTAGTTCTGTTGATCCTCAAGGAGATAATATTCTAG 981 0.4281 MATRNRTVEFRKYRDSVKSLRTPLSSSASASSGGGPVIEMVNTSLLRTNNGSSYTPLSTHDPGPSSSSDAFTVGLPPSWVDDSEEIATNIQSAKVKMSELTKAHAKALMPSFGDGKDDQRQIETLTREITALLRKSEVRLKRLSAGRGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYLKRLQQQQEGYDGIDLEMNFKGSSSGFQDDEFDDVGFSEEQMTKLKKNEHISAEREREIDQVAKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATTVEEGLKQLQKAERTQKKGGMITCATVLVIMCFVMLVLLILKEIIF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3462 326 MobiDBLite consensus disorder prediction 19 37 - -
Mtr7g3462 326 MobiDBLite consensus disorder prediction 16 37 - -
Mtr7g3462 326 SMART tSNARE_6 225 292 IPR000727 -
Mtr7g3462 326 ProSitePatterns Syntaxin / epimorphin family signature. 236 275 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mtr7g3462 326 SMART SynN_4 70 186 IPR006011 GO:0016020
Mtr7g3462 326 Gene3D - 76 284 - -
Mtr7g3462 326 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 321 - -
Mtr7g3462 326 Pfam SNARE domain 266 318 IPR000727 -
Mtr7g3462 326 PANTHER SYNTAXIN 1 321 IPR045242 -
Mtr7g3462 326 CDD SNARE_syntaxin16 234 291 - -
Mtr7g3462 326 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 230 292 IPR000727 -
Mtr7g3462 326 MobiDBLite consensus disorder prediction 49 69 - -
Mtr7g3462 326 SUPERFAMILY t-snare proteins 75 285 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3462 Mtr-Chr7 51632618 51638482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3462 1 326 SNARE and Associated Proteins AT4G02195 67.584 4.54e-158 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3462 K08489 - gmx:100803629 523.472