Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3460 ATGTCTTCCTCCGATGCCCATACCGCACCCACTAATATCAACCCCAAATGTATCCTCTTCAATGCTGCATCCGGTGCTTCCGCTGGAGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTTATCAAAACTAGGTTTCAAGTTGGTGTTCCCCAGCTCGCTAATGGAACTGTTAAAGGTAGTGTGATAGTGGCTAGTTTGCAACAAATATTCCACAAGGAGGGGTTACGCGGCATGTACCGTGGGCTGGCTCCCACTGTGTTAGCTTTGCTTCCAAATTGGGCGGTTTATTTTACTATGTATGAGCAGCTCAAAAGCCTTCTTCATTCTGATGATGAAAGCCATCACCTTTCAGTTGGATCTAATATGGTAGCTGCTGCTGGTGCTGGAGCTGCAACTACCTTGTTTACAAATCCACTCTGGGTTGTCAAGACTAGACTTCAAACCCAGGGAATGAGATCTGGTGTTGTGCCATATAGGAGCACACTATCTGCATTGAGGAGAATTGCAAGTGAGGAGGGCATACGGGGGCTGTACAGTGGCCTTGTACCTGCTCTAGCCGGTATCAGTCATGTTGCCATTCAATTCCCGATGTATGAAACAATTAAATTTTATTTAGCAAATCAAGATGACGCAGCAGTCGATAAACTTGGTGCACGTGATGTTGCTATTGCTTCATCAGTCTCCAAAATTTTTGCATCCACATTGACATATCCCCATGAGGTTGTACGTTCCAGATTGCAAGAACAAGGGCATCACTCTGAGAAACGATACTCTGGTATGATTGACTGCATTAGAAAGGTTTTTCAACAAGAAGGTGTGCCTGGCTTTTACCGAGGATGTGCTACCAACCTTTTGAGGACAACACCAGCTGCCGTAATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTTGTTTCACATTTTCCTTCTGATCCACAACCTCATATTTTATGA 960 0.4437 MSSSDAHTAPTNINPKCILFNAASGASAGVIAATFVCPLDVIKTRFQVGVPQLANGTVKGSVIVASLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKSLLHSDDESHHLSVGSNMVAAAGAGAATTLFTNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIASEEGIRGLYSGLVPALAGISHVAIQFPMYETIKFYLANQDDAAVDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGMIDCIRKVFQQEGVPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSHFPSDPQPHIL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3460 319 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 8 318 - -
Mtr7g3460 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 205 IPR018108 -
Mtr7g3460 319 Gene3D Mitochondrial carrier domain 17 309 IPR023395 -
Mtr7g3460 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 305 IPR018108 -
Mtr7g3460 319 PRINTS Mitochondrial carrier protein signature 21 34 IPR002067 GO:0055085
Mtr7g3460 319 PRINTS Mitochondrial carrier protein signature 34 48 IPR002067 GO:0055085
Mtr7g3460 319 PRINTS Mitochondrial carrier protein signature 82 102 IPR002067 GO:0055085
Mtr7g3460 319 PRINTS Mitochondrial carrier protein signature 132 150 IPR002067 GO:0055085
Mtr7g3460 319 PRINTS Mitochondrial carrier protein signature 226 248 IPR002067 GO:0055085
Mtr7g3460 319 Pfam Mitochondrial carrier protein 21 110 IPR018108 -
Mtr7g3460 319 Pfam Mitochondrial carrier protein 223 308 IPR018108 -
Mtr7g3460 319 Pfam Mitochondrial carrier protein 117 208 IPR018108 -
Mtr7g3460 319 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 8 318 IPR044712 GO:0006862|GO:0055085
Mtr7g3460 319 SUPERFAMILY Mitochondrial carrier 19 301 IPR023395 -
Mtr7g3460 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 107 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3460 Mtr-Chr7 51617570 51624342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3460 14 313 Chloroplast and Mitochondria Gene Families AT2G47490 77.076 2.13e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3460 K15115 - gmx:100500213 553.132