Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3459 ATGGCATCATCAGAGGCATCGTTTTCCTTTTCAGTTGCGTCTGTTGTTGAAGATGTGCTTCAACAACACGGTCATCGTCTCCAAGATCTTGATTTAGAATCTAGAAAAGCACAACAAGCTGCATCTAGAAGATATGAAGCGGCAGGGTGGTTGAGAAAAATGGTCGGAGTTGTTGCCGCGAAAGATTTACCAGCAGAGCCATCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTTTGTAATGTTATTAATAAATTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTGATCCCTGATGGAGCCCCATTATCAGCATATCAGTATTTTGAAAATGTGAGGAATTTTCTGGTGGCTGTACAAGAAATTGGACTTCCTACTTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGCGTCTTGGCCCTTAAATCCTATGGTGAATGGAAACAAAATGGGGCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCTACCATCTCTGCAAAATCTCTTGTGAGAAAAAACTCAGAACCATTTACTAATTCCTTGTCAAGGACCTCATCAATCAATGAAAAAACTCTGGCTACTCTTAATTCTGATGTTGAGTCTAATAAAATGTCTAGTTCCCATTCTTTGAGCATGCTTGTTCGTTCTATTCTGTCAGATAAGAACCAAGATGAAATTCCAATGTTGGTTGAATCCGTTTTGAATAAGGTTGTAGAAGAGTTTGAACATCGTATCGCAAGCCAAGGCGAACAGGTGGAGAACAAGATTCATATGGTAGCAAAGAAAGAGGATCACATTGAAAAGAATCGTGTGGCTGCTGAGGAATTGCAAAGCCAACACCTGAAGCAACAAATGCTCTTTGACCAACAACAAAGAGACATTCAAGAGCTAAAGCTTACTCTTCACACCACAAAAGCTGGAATGCAGTTCATGCAAATGAAATTTCGTGACGAGTTTACCAATCTTGGAACGCACATTCGTGGCTTAGCTCACGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGTAAACTATACAATGAAGTTCAAGATCTTAAGGGAAGTATTAGGGTATACTGTCGAGTAAGACCCTTCTTTCCCGGACAACGAAACCAATTTAGCGCAGTAGAAAATATAGAAGATGAAACTATCACAGTTAGTATTCCGTCAAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGATCATCTGCTACCCAAGCGGAGGTCTTCCTTGATATGCAACCACTTATTAGATCTGTTCTTGATGGCTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCTGGAAAAACTTACACGATGACTGGACCGAAAGAAATCACAGAGAAAAGCCAAGGTGTAAATTATAGGGCTCTAAGTGATTTGTTTATGATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTATGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGGGATCTATTGGTCACTGATGGAACAAACAGAAGATTAGAAATTCGTAGTAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCTCTGTGTCATCAACCTTTGATGTTATCGACCTAATGAACCTTGGGCACAGGAACCGTGCAGTTGGAGCAACCGCCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTACCACCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAGTCTGAGGCCACCGGAGATAGACTGAAAGAGGCACAACATATTAACAAATCTCTATCAGCTTTGGGTGATGTCATTGCGTCCCTTGCTCATAAAAACTCACACGTACCTTATAGAAATAGTAAGCTCACACAATTGCTCCAAGATTCACTAGGAGGACAGGCTAAGACACTGATGTTTGTTCACATAAGTCCAGAAAGTGATGCAATTGGAGAAACAATTAGCACTTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCCAATGTTAAAGAGCTCAAAGAACAGATTGCCAGTCTTAAGGCAGCATTGGCAAGAAAAGAAGGGGAACCGGAACATTCTTTTTCCGGAAGCTCTGAAAAATATAGGACAAAGGCTAGTGAGCCATCTCCTTATCACATAAACCAGCGAGTTGCAGACACTGGTGATCAGCTTGGATGCCGGCGACCAATGGTTGAAGTTGGCAACATTGAGCTTCAGAGTAAAACCGTATTGAGGCAGAAAACTCAAAGCTTTGATTTTGATGAGATATCAGCAAATTCACCACCATGGCCTCCAGTGAATAGTCTTGGACAAGACAACGGGGAGGATGAAAAAGAAACAGGTTCAGGAGAATGGGTTGATAAGGTAATGGTAAAAAAGCTAGAAGCAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAGAAAGCAATGGGAACTTATCTGAGTCATTTTATCAAACATATCTCCAAGATTCTTCCAAAATGTACTCCGAACAGTCCTATAATATGTTCATGGGAGGTAACCAGTTTAATAGCATTAATATGGGTTCAGATGATAACACGGACGAGGTTGATGCTATAACCAGTGATTCCTCAGAACCTGACTTGCTGTGGCAATTTAATCATTCTAAGCTTAGTAGTTTGACCAATGGAATTGGAACAAAGGCTATGAGATCTGTCTCAAAGGCAACAAAAAGCCCAGAATTGAGCAAGAGTTTTGTTCATTCTTCTCTTGGTCCTTCACCTTCGTTGAAACAATCAAAAGTTGTCTCACATAGGACAGGAAGGAGTCCAGCTCCTGTTGACATGAAACGTAAAATTGGTAGAAAGTAA 2967 0.4105 MASSEASFSFSVASVVEDVLQQHGHRLQDLDLESRKAQQAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKFQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYGEWKQNGANGVWKFGGNLKPTISAKSLVRKNSEPFTNSLSRTSSINEKTLATLNSDVESNKMSSSHSLSMLVRSILSDKNQDEIPMLVESVLNKVVEEFEHRIASQGEQVENKIHMVAKKEDHIEKNRVAAEELQSQHLKQQMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFRDEFTNLGTHIRGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQRNQFSAVENIEDETITVSIPSRNGKGQRSFNFNKVFGSSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFMIADQRKDTFHYDVYVQMIEIYNEQVRDLLVTDGTNRRLEIRSSSHKGLSVPDASLVSVSSTFDVIDLMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGATTRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAHKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDGANVKELKEQIASLKAALARKEGEPEHSFSGSSEKYRTKASEPSPYHINQRVADTGDQLGCRRPMVEVGNIELQSKTVLRQKTQSFDFDEISANSPPWPPVNSLGQDNGEDEKETGSGEWVDKVMVKKLEANKTENLLGCWQESNGNLSESFYQTYLQDSSKMYSEQSYNMFMGGNQFNSINMGSDDNTDEVDAITSDSSEPDLLWQFNHSKLSSLTNGIGTKAMRSVSKATKSPELSKSFVHSSLGPSPSLKQSKVVSHRTGRSPAPVDMKRKIGRK* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3459 988 Coils Coil 278 298 - -
Mtr7g3459 988 Pfam Calponin homology (CH) domain 42 163 IPR001715 GO:0005515
Mtr7g3459 988 MobiDBLite consensus disorder prediction 936 971 - -
Mtr7g3459 988 MobiDBLite consensus disorder prediction 936 988 - -
Mtr7g3459 988 Coils Coil 707 734 - -
Mtr7g3459 988 MobiDBLite consensus disorder prediction 729 743 - -
Mtr7g3459 988 ProSiteProfiles Calponin homology (CH) domain profile. 41 163 IPR001715 GO:0005515
Mtr7g3459 988 MobiDBLite consensus disorder prediction 799 827 - -
Mtr7g3459 988 SMART kinesin_4 373 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 ProSiteProfiles Kinesin motor domain profile. 375 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 CDD KISc_C_terminal 373 702 - -
Mtr7g3459 988 Pfam Kinesin motor domain 381 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 Gene3D Kinesin motor domain 370 740 IPR036961 -
Mtr7g3459 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 732 IPR027417 -
Mtr7g3459 988 PRINTS Kinesin heavy chain signature 448 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 PRINTS Kinesin heavy chain signature 570 587 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 PRINTS Kinesin heavy chain signature 601 619 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 PRINTS Kinesin heavy chain signature 650 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr7g3459 988 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 986 - -
Mtr7g3459 988 Gene3D - 28 191 IPR036872 -
Mtr7g3459 988 SUPERFAMILY Calponin-homology domain, CH-domain 42 174 IPR036872 -
Mtr7g3459 988 MobiDBLite consensus disorder prediction 729 754 - -
Mtr7g3459 988 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 3 986 - -
Mtr7g3459 988 SMART ch_5 43 161 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3459 Mtr-Chr7 51594118 51600354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3459 363 700 Calmodulin-binding Proteins AT5G65930 42.183 3.10e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3459 K10406 - gmx:100795476 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3459 7 51594118 51600354 Mtr1g3184 1 43143774 43150106 PCT