Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3446 ATGGCTTTCCATAACTTTTTCATTCTTACACTCTGCTTTTCTCTTTCACTTTCCATCTTGGCATCATTACCATCATCATCCCTAGCTGATAATTCTAAGGTCCCACCACAAACAATCTGCGAGTCCACCGTAAACCCTCCCTTTTGCAAAACTCTACTTGCTAACCAAAACGGCACCGTAATTGACTATGGTCGTTTCTCCATCCGAAAATCCTTATCCCAATCCCGCAAATTCTTAAACTTAGTACTTTCGTATCTTCAAGATAAATCATCTTTGTCACAACCAACAATTTCAGCTCTTAAAGATTGTCAATTTCTAGCCCAACAAAATTTCGAATTCTTATCAAACACTCATCAAACTGCTAATAAAACTAGCAATGTTCTTCCCATTTCTCAAGGCGAAGAATTACAAACCTTGCTTAGTGCTGTTTTAACAAACCAACAAACTTGTTTAGATGGTTTAGTTACTGCATCTTCTGATCAAACGGTGATTAATGATTTTTCATCAACAATTTCCGATGATACAAAGATTCATAGTGTGTCCCTTGCTCTATTTTTAAAGGGTTGGGTTGGTGACAAGAAAAAACAAACATCATGGCCACAAAATGGAAGACATTTGAATTTTCACAACGGTCATTTACCTTTCAAAATGTCAGATAAAGTGCGTGCTATTTATGATTCAGCTAGAAATCGACATGGGCGAAAGTTACTTCAAACAATTGATGAAAGTGTTACTGTAAGTGAAATTGTGATTGTTAATCAAGATGGAAGTGGAAATTTTACAACAATTAATGATGCTATAAACGTTGCACCAAATAACACGGTTGCTAGTAGTGGTTACTTTCTGATTTTTGTTACCGAGGGTATTTATCAAGAGTATGTATCTATACCCAAAAACAAGAAGTACTTGATGATGGTTGGAGATGGGATTAATCGAACGATTATCACTGGTGATCATAATGTTATTGATGGTTCTACAACGTTCAATTCAGCAACATTTGCTGTGGTTGCACAAGGATTCTTAGCGGTTAACATGACATTTCGCAACACGGCTGGACCAAGCAAACACCAAGCAGTCGCGGTAAGAAACGGAGCTGATTTGTCCACCTTCTACAGCTGCAGCTTCGAAGGCTATCAAGATACTTTGTACACACATTCCATGAGGCAATTTTATCGCGAATGTGACATCTATGGAACAGTTGACTTCATATTTGGAAATGCTGCTGTTGTTTTACAATCTTGCAACATATATCCCCGACTTCCCAACAGTGGACAATTCAACGCTATAACCGCTCAAGGCCGAACGGATCCAAATCAAAACACAGGAACTTCTATACATAATGCAACTATAAAAGCTACTGATGATTTGGCTCCGTTGATTGGTACAGTGAAAACATACCTTGGTAGGCCATGGAAAGAGTACTCAAGGACAGTTTATATGGAATGTTTTATGGAAAGTTTGATAAATCCTTCTGGTTGGCGTGAATGGAGTGGGGATTTTGCATTAAGCACATTATATTATGCAGAGTATAATAATACAGGACTTGGTTCAAATACTAGTATGAGAGTGAATTGGATTGGCTATCATCTTATTAATGCTACTGATGCTGCTAATTTTACAGTGGATAACTTTTTGGATGGGGATAGTTGGTTGCCTCAAACTGGTGTTTCATACTTGAGTGGATTGATCATATAA 1695 0.3758 MAFHNFFILTLCFSLSLSILASLPSSSLADNSKVPPQTICESTVNPPFCKTLLANQNGTVIDYGRFSIRKSLSQSRKFLNLVLSYLQDKSSLSQPTISALKDCQFLAQQNFEFLSNTHQTANKTSNVLPISQGEELQTLLSAVLTNQQTCLDGLVTASSDQTVINDFSSTISDDTKIHSVSLALFLKGWVGDKKKQTSWPQNGRHLNFHNGHLPFKMSDKVRAIYDSARNRHGRKLLQTIDESVTVSEIVIVNQDGSGNFTTINDAINVAPNNTVASSGYFLIFVTEGIYQEYVSIPKNKKYLMMVGDGINRTIITGDHNVIDGSTTFNSATFAVVAQGFLAVNMTFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQSCNIYPRLPNSGQFNAITAQGRTDPNQNTGTSIHNATIKATDDLAPLIGTVKTYLGRPWKEYSRTVYMECFMESLINPSGWREWSGDFALSTLYYAEYNNTGLGSNTSMRVNWIGYHLINATDAANFTVDNFLDGDSWLPQTGVSYLSGLII* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3446 564 SMART PMEI_2 31 184 IPR006501 GO:0004857
Mtr7g3446 564 PANTHER PECTINESTERASE 22 562 - -
Mtr7g3446 564 PANTHER PECTINESTERASE 22 562 - -
Mtr7g3446 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 185 IPR035513 -
Mtr7g3446 564 Gene3D - 243 562 IPR012334 -
Mtr7g3446 564 SUPERFAMILY Pectin lyase-like 245 561 IPR011050 -
Mtr7g3446 564 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Mtr7g3446 564 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Mtr7g3446 564 Pfam Plant invertase/pectin methylesterase inhibitor 37 183 IPR006501 GO:0004857
Mtr7g3446 564 CDD PMEI-like_3 38 189 - -
Mtr7g3446 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3446 Mtr-Chr7 51482144 51485370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3446 6 563 Carbohydrate Esterase AT4G02330 59.483 0.0 671