Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3445 ATGGCTTCCAAGCTATGTAATCCCCTCTCAATATTTCTCATTCTTTTATCTGTCTCTATAGCATTTTCACAAAACACCGTTAATAATCCAAATCCAATTACACCTATTTCACCAGGAGCAGCATGCAAATCCACCCCTGACCCAACCTATTGCAAATCCATTCTCCCACCTCAAAACGCTAACGTTTATGATTATGGTCGATTCTCAGTCAAAAAATCACTATCACAATCCCGAAAATTCTCAGACCTAATCAACAAATATCTCCAACGTCGCTCCACTCTTTCCACCACCGCTTTGCGAGCACTACAAGATTGTCAATCGCTCAGCGACCTCAACTTTGATTTCCTTTCAAGCTCTTTTCAAACTGTTAACAAAACAACAAAGTTTCTTCCAAGTTTACAAGGTGAAAATATCCAAACATTACTCAGCGCGATTCTGACAAACCAACAAACTTGTTTGGATGGTCTTAAAGACACTTCGTCAGCTTGGAGTTTTCGAAATGGACTCACAATTCCACTTTCTAATGACACCAAACTCTATAGTGTCTCTCTTGCTTTCTTTACCAAAGGTTGGGTTAATCCCAAAACCAATAAAACCTCGTTTCCTAATTCCAAACACTCCAACAAAGGATTTAAAAACGGGCGTTTGCCGCTTAAGATGACGAGCAAAACACGCGCGATTTATGAGTCAGTTAGTCGGAGAAAGCTTCTTCAGAGTAATCAAGTTGGAGAGGATGTTGTGGTGAGAGATATTGTGACGGTTAGTCAAGATGGAAGTGGAAACTTTACCACGATTAATGATGCTATTGCTGCAGCTCCAAATAAATCTGTTTCTAGTGATGGATATTTTTTGATCTATGTTACTGCTGGTGTTTATGAAGAGTATATTACCATTGATAAGAAAAAGACTTATTTGATGATGATTGGAGATGGCATCAACAAGACTATTATCACTGGCAATCATAGTGTTGTTGATGGCTGGACCACATTCGGCTCCCCAACATTCGCTGTCGTTGGGCAAGGATTCGTGGGTGTGAACATGACCATCCGTAACACAGCAGGTGCTGTTAAGCACCAAGCAGTGGCACTTAGAAACGGGGCAGATTTATCAACATTTTACAGTTGCAGTTTCGAAGGGTACCAAGACACGTTATACACACATTCACTAAGACAATTCTACAGAGAATGTGACATTTATGGAACAGTAGATTTCATATTCGGAAATGCTAAGGTTGTTTTCCAAAATTGTAACCTCTATCCACGTCTTCCAATGAGTGGACAATTCAATGCAATCACTGCACAAGGAAGAACAGATCCTAACCAAGATACAGGTACATCAATCCACAACTGTACTATTAAAGCTACTGATGATTTAGCTGCTAGTAATGGTGCTGTTTCAACATATTTGGGAAGACCATGGAAAGAGTATTCTAGAACGGTTTACATGCAAACATTTATGGATAATGTGATTAATGTTGCTGGGTGGCGTGCTTGGGATGGAGAATTTGCATTGAGCACATTGTATTATGCTGAGTTTAATAATAGTGGGCCAGGCTCTAGCACTGATGGTAGAGTGACGTGGCAAGGGTATCATGTGATTAATGCCACGGATGCAGCTAATTTTACGGTGGCAAATTTCTTGCTTGGTGATGATTGGTTGCCTCAGACAGGGGTGTCTTACACTAATTCCTTAATTAGTTAA 1701 0.4015 MASKLCNPLSIFLILLSVSIAFSQNTVNNPNPITPISPGAACKSTPDPTYCKSILPPQNANVYDYGRFSVKKSLSQSRKFSDLINKYLQRRSTLSTTALRALQDCQSLSDLNFDFLSSSFQTVNKTTKFLPSLQGENIQTLLSAILTNQQTCLDGLKDTSSAWSFRNGLTIPLSNDTKLYSVSLAFFTKGWVNPKTNKTSFPNSKHSNKGFKNGRLPLKMTSKTRAIYESVSRRKLLQSNQVGEDVVVRDIVTVSQDGSGNFTTINDAIAAAPNKSVSSDGYFLIYVTAGVYEEYITIDKKKTYLMMIGDGINKTIITGNHSVVDGWTTFGSPTFAVVGQGFVGVNMTIRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAKVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQDTGTSIHNCTIKATDDLAASNGAVSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGRVTWQGYHVINATDAANFTVANFLLGDDWLPQTGVSYTNSLIS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3445 566 Pfam Plant invertase/pectin methylesterase inhibitor 40 185 IPR006501 GO:0004857
Mtr7g3445 566 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 20 563 - -
Mtr7g3445 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 189 IPR035513 -
Mtr7g3445 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
Mtr7g3445 566 Pfam Pectinesterase 252 550 IPR000070 GO:0030599|GO:0042545
Mtr7g3445 566 SUPERFAMILY Pectin lyase-like 249 561 IPR011050 -
Mtr7g3445 566 Gene3D - 246 564 IPR012334 -
Mtr7g3445 566 SMART PMEI_2 33 186 IPR006501 GO:0004857
Mtr7g3445 566 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Mtr7g3445 566 PANTHER PECTINESTERASE 20 563 - -
Mtr7g3445 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Mtr7g3445 566 CDD PMEI-like_3 40 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3445 Mtr-Chr7 51471500 51474098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3445 9 566 Carbohydrate Esterase AT4G02330 61.606 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3445 K01051 - gmx:100800971 926.391