Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3443 ATGTCTACTAGTACTGATCCAAACCTAGAAGCAAAGTATGCCCTTAACAGCAAGGTCATGATAGGATCTTCCATCCTTCTCTTCATACTCATACTCATCATCCTTCTCTTTCGCACTTACGTTTACATCTGCCACCTTCGCAGCCGTCGTCTATTCTCTCAAGATTCTGTTACAACCACCACTTTCAAAGAAGAACGCCTTGACCCTTCCGTTCTAAAGTCGCTTCCAACATTTACTTACTCCTCCTCCTCCTCCGCAACCGGTCGTACTCTCCATGACTGCGCTGTCTGCTTGTCGGAGTTCACCGACGGTGATGAATGCCTTACGCTTCCAAACTGTAACCATGATTTTCATTCCCTGTGTGTTGAACCGTGGTTTGCTTCTCATTCTAATTGCCCTCTTTGTCGAGCTCCGGTCCAACCGGCGAAGGTTCAGTCTTACACTGAAACGTGTACTGTTTTAGGTTCAGGAGAACCGGGCGAGGGTTGTTCTAATTTTCCTGAACCGGTTTGGTGTCCAAGAAAGCCGTTTAGTGTAATTGTAGAGTTACCACCAGAGGTGGTGCGGGTCGGATCTTGTACCCGAAGATAA 591 0.4721 MSTSTDPNLEAKYALNSKVMIGSSILLFILILIILLFRTYVYICHLRSRRLFSQDSVTTTTFKEERLDPSVLKSLPTFTYSSSSSATGRTLHDCAVCLSEFTDGDECLTLPNCNHDFHSLCVEPWFASHSNCPLCRAPVQPAKVQSYTETCTVLGSGEPGEGCSNFPEPVWCPRKPFSVIVELPPEVVRVGSCTRR* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3443 196 Pfam Ring finger domain 93 136 IPR001841 -
Mtr7g3443 196 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Mtr7g3443 196 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 10 154 - -
Mtr7g3443 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 142 IPR013083 -
Mtr7g3443 196 SMART ring_2 94 135 IPR001841 -
Mtr7g3443 196 PANTHER RING-H2 FINGER PROTEIN ATL64 10 154 - -
Mtr7g3443 196 SUPERFAMILY RING/U-box 72 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3443 Mtr-Chr7 51463968 51465149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3443 13 140 Rapid Response to Elicitors AT3G16720 33.793 1.17e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3443 - - cam:101488632 213.386