Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3439 ATGGGTATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACTAAACGTACAGCACCAAAATCCAATGATATCTACCTCAAGCTTCTCGTTAAGCTATACCGTTTCCTTGTTCGAAGGACTGAAAGTAATTTCAATAAGGTTATCCTTAAGAGGCTTTTCATGAGCAAAGTCAACAAGCCACCTTTATCACTGTCTAGGTTGATTCGTTACACCAAAGGAAAGGAGGGTAAGATTGCTGTAGTTGTTGGTGCCGTGACAGATGATATTAGGGTTTATGAAGTACCTGCAATTAAGGTAACTGCTCTAAGGTTCACCGAAAAGGCCAGGGCTAGAATTGAGAAGGCTGGTGGGGAGTGCCTCACCTTTGATCAGCTGGCTCTTAGAGCTCCTTTAGGCCAGAACACGGTTCTTCTTAGAGGTCCCAAAAATGCTCGTGAGGCTGTCAAGCACTTCGGACGAGCTCCTGGTGTGCCACACAGCAACACTAAGCCCTATGTCCGTGGGAAAAAATCACGAAAGGTTGAAGCCGCTAGAGGAAAAAGGAAGAGCAGAGGCTTTAAAGTTTGA 567 0.4533 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKPPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSNTKPYVRGKKSRKVEAARGKRKSRGFKV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3439 188 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Mtr7g3439 188 Pfam Ribosomal protein 60S L18 and 50S L18e 2 188 IPR021131 -
Mtr7g3439 188 PANTHER BNAC02G39900D PROTEIN 1 188 - -
Mtr7g3439 188 Gene3D - 1 188 - -
Mtr7g3439 188 MobiDBLite consensus disorder prediction 152 188 - -
Mtr7g3439 188 PANTHER 60S RIBOSOMAL PROTEIN L18 1 188 IPR000039 GO:0003735|GO:0005840|GO:0006412
Mtr7g3439 188 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3439 Mtr-Chr7 51446379 51448811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3439 3 188 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.540 1.71e-101 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3439 K02883 - gmx:100499789 333.569