Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr7g3431 | ATGATTATAACAATACGCCTTATTTTACTATTAGTATTTCTTTCACTCTCAACAAATACTAGCCAAATTGTATATGCAAAAGGAAACAACAACAATAATGTTAAGGAAGCTTGCAGTGTCACAAGGTACCAAAACCTTTGCATCCACACACTAGCACAATTCTCCAACACAGCAGGAAGAACCCCAAGCAAATGGGCACGTGCGGGTGTGTCGGTAACGATAAGCGAAGTTAAGAATGTTCAAGCATATCTTACAAAATTAAAGAAGAACGGGAAGATGAAAGGAAGAAACAGAGTTGCACTTTCAGACTGTATAGAAACTTTTGGCTATGCAGTTGATGAGCTTCATAAGTCACTTGGTGTGCTTAGGAAATTAAGCAAGAACACATTTAGTACACAAATGGGGGATCTCAACACATGGATTAGTGCAGCTCTTACTAATGAAGACACATGCCTTGATGGGTTTGAAGGGAAAACGGAGAAGAAAATTAAATTGCTGCAAAATAAGGTTAAGAACGTGTCTTACATAACAAGTAACGCACTTGCTCTTGTCAATAAACTTGCATCTACGGGTCTTGAATTTATAGGTAACTGA | 594 | 0.3788 | MIITIRLILLLVFLSLSTNTSQIVYAKGNNNNNVKEACSVTRYQNLCIHTLAQFSNTAGRTPSKWARAGVSVTISEVKNVQAYLTKLKKNGKMKGRNRVALSDCIETFGYAVDELHKSLGVLRKLSKNTFSTQMGDLNTWISAALTNEDTCLDGFEGKTEKKIKLLQNKVKNVSYITSNALALVNKLASTGLEFIGN* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr7g3431 | 197 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 6 | 187 | IPR006501 | GO:0004857 | |
| Mtr7g3431 | 197 | Pfam | Plant invertase/pectin methylesterase inhibitor | 33 | 183 | IPR006501 | GO:0004857 | |
| Mtr7g3431 | 197 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 29 | 189 | IPR035513 | - | |
| Mtr7g3431 | 197 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 13 | 182 | - | - | |
| Mtr7g3431 | 197 | CDD | PMEI-like_3 | 37 | 189 | - | - | |
| Mtr7g3431 | 197 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN | 13 | 182 | - | - | |
| Mtr7g3431 | 197 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 32 | 188 | IPR035513 | - | |
| Mtr7g3431 | 197 | SMART | PMEI_2 | 29 | 183 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr7g3431 | Mtr-Chr7 | 51361972 | 51363077 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr7g3431 | 34 | 192 | Carbohydrate Esterase | AT3G14310 | 34.146 | 2.86e-21 | 89.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr7g3431 | - | - | gmx:100791264 | 265.774 |