LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g3405	ATGGAGCTCTGGAACGACGGTTTATCGGAGCCGGAGATTGGAAGTTCCGTTGAGTCGTTCCAGAGGTTTTTGGCTTCTCAAAGAGAACTCGTACATAGCCAGATCGATCAGTTTCAGAATATCATCGTCACGCAATGTAAACTCACCGGCGTTAATCCTCTCGCTCAAGAAATGGCTGCTGGTGCATTGTCAATAAATATCAGAAAAAGACCTAGGGATTTATTAAATCCGAAGGCTGTGAATTACATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGCAAGAAAGAATCCCGTGAGACCAGTGCTTTATTTGGCGTGACAGTTACACAGGTGCGTGACTTTTTCACTGGTCAACGTTCAAGAGTGAGGAAACTAGCTCAGCTGTCAAGGGAGAAGGCTTTAAAATCTAACTCTTGTGCAGAATCTCTTGATATGCAAATAAACCCTGATCCCGTGAGAACAATAAATCCAGCTCCCTTAAACTCTGCTGGTGCCATCAACATGGAAGAAGCATCCTGCCCAACACAACAAACAGCTCTTTCTGACCTAGACGAGTTAGACAAACAATTTGTTGAGAACATTTTTGGCCTAATGCAGAAAGAGGAAACCTTTTGTGGACGGGAGAAGTTGATGGAGTGGATATTGACAATACATAATTTTTCAGTCTTGCTGTGGTTTTTGACTGGAGGAGGTGCAATGACTTTAGCAAATTGGTTGAGTAAAGCTGCTGTTGAAGAGCAAACAAGTGTACTGCTTCTTATCTTGAAGGTTCTTTGTCATCTGCCTTTACATAAAGCAATTCCTGCACACATATCAGCTTTATTGCAGAGTGTTAATAGACTACGGTTCTACCGGACATCAGACATTTCTAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTGTTAACAAGGAACCAAGCCATAAAGAAACCCAATGGTGTTAAGCGTTCCGGTGATGGTCAAAAAGAGACAAGACTATCTCAGAGCAATGGTCAACTCGTCGGCCCTGAATCATGGCATTTTGATGTTCCTGAAGACGTTCTTGCTCTCTCGAATGAATTTTCAGATGATTTCAGGAAACTAGAATCTCAATCTGTGAAATTGTTGCTGCCCAGCTCAGATGATTGTAATAAGAAACACCCCCTTGGTGCATCTTCATCTCAAGCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGATCAGTGAGTAGAAGCCCACAGACGGCAAGGACAGGGCCAGTAACTCAGAGCCGTCCTATGTCTACTGATGATATCCAGAAAGCAAAAATGCGTGCATTATTTATGCAGAGTAAATACAAGAAAACTGCTTCTATAAAAGAAAATAAAGAAGCGAAAATCAATAGTCCGAGTAAGTCTCTAACAAATCAGGGAAGCATTGCAGTCTGCTCTTCCAAAGTTCCAGCGCCGCTCAAAATTGAAGACAAGAAACCTCTGTTGCATCCGCCTAAAACCACTAATAGGCTGGAAGCTTCTTATTCCAAACTGAAGATGGATTTGAAGGAGCCTCTCTGGGAGAAGTGCAAGAGGGTGAAAATCCCATGGAAATCACCAGCAGAAGTAAAACTTGAAGATACCTGGAGAGTGGGTGCTGGGGTAGATAGCAAAGAGGTTCATGTTCAGGAAAACAGAAACCGTAGGGACAAAGAAACCATTTATAAGACAGCACAAGAGATGCCCTCTAACCCCAAGGAGCCTTGGGATGTTGAAATGGACTACGATGATTCTTTGACACTGGAAATTCCTATTGAACAGCTACCAGATTGTGACGACGTAGAAATGGATGCATCTGATCAAGTTGCAACTCATGCTGCTGTTCAAGGGGTGGCCTCCTCATCTTCAGCCAGTAATGCAGCAACTGCTCAACCTGACATGCAGTTGCTTGCCGTACTGCTAAATAATCCAGACTTGGTATTTGCCTTAACTTCTGGACAAGTTGGCAACATATCAGATGAGCAAACCTTGAAGCTGCTTGACATGATCAAGAGTGGCAATGTGAACTTGGGATTAAGTGAAATTGCAAATGGCAACTATGGTGCTATTGCAAGGGCCCCCGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACTCCTTCAAGTGATCCAAGCACGAATGGATGCAGCATAGAAGCACCAAAGAATCCTTTTACAAGGCAAAACTTAGCAACTGATAGACGAATTTTCCAGAGCCCTGCTTCAATTGCAACTACCAACTTATCATCTCAAATTCCAGCTACTAATACTGCAGTAAGGCAACAGCATACAGTCATTCCATCTTCAAAGCAGCTAACCGGCACAACAGTTTCTCAATATTCACTACCAAAAGCAACTAATATTATTCATGAAAAACAACCAGTTCACTCCTCCGCGTATGCGCAAACACAATTCTCTGATAGAGGTCTAGCCATGAGGAACACAATCACCGCAAATGTATCTTCGGTTGGCGCACATTCACCTCTAGCAATCCGGGCTGATGGCATAAGTAATATAAAACCAATATTACCTAATTCAAATATACAAGAGGGTTCGTCTAATTCATTTCAACAACCAACATCACGCTCAGCCACACAACAACAAAGACATACTCATATGATGCCCCACCAGCCCCATTTTGCAGAACCTTCCTATCAGAACCCTGTCCATCCCTATCAACCACAATTCGAAAGATCGGGTCCTGTGTCAGATTTGCGGAGAGTTAGGCAGGATATACCACCCATTTATCATTCTCAACGAAATCATAACACAATGGTTGGGGGGTCAATGCAATCTGGTTCATGGGATACAAACAATCATGGAAGGGAGGGATATGAATCATGGAGTCCGGAGAATAGTCCAACTAGGAATCCTCCTAGGTATGCTCCAGGTAGGAATCTCCCAGAGTCCAGGAATCATGTAAGAAATCATAGACCTGAGTGGTCAAGGCAGCGGGGTTCTTCTGGACACTGGGACCCTGGTAGGCATGAGAATAGAAAATGGCATGATCAGAGGCGATGA	3024	0.4335	MELWNDGLSEPEIGSSVESFQRFLASQRELVHSQIDQFQNIIVTQCKLTGVNPLAQEMAAGALSINIRKRPRDLLNPKAVNYMQSVFSIKDAISKKESRETSALFGVTVTQVRDFFTGQRSRVRKLAQLSREKALKSNSCAESLDMQINPDPVRTINPAPLNSAGAINMEEASCPTQQTALSDLDELDKQFVENIFGLMQKEETFCGREKLMEWILTIHNFSVLLWFLTGGGAMTLANWLSKAAVEEQTSVLLLILKVLCHLPLHKAIPAHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLTRNQAIKKPNGVKRSGDGQKETRLSQSNGQLVGPESWHFDVPEDVLALSNEFSDDFRKLESQSVKLLLPSSDDCNKKHPLGASSSQARERRKVQLVEQPGSVSRSPQTARTGPVTQSRPMSTDDIQKAKMRALFMQSKYKKTASIKENKEAKINSPSKSLTNQGSIAVCSSKVPAPLKIEDKKPLLHPPKTTNRLEASYSKLKMDLKEPLWEKCKRVKIPWKSPAEVKLEDTWRVGAGVDSKEVHVQENRNRRDKETIYKTAQEMPSNPKEPWDVEMDYDDSLTLEIPIEQLPDCDDVEMDASDQVATHAAVQGVASSSSASNAATAQPDMQLLAVLLNNPDLVFALTSGQVGNISDEQTLKLLDMIKSGNVNLGLSEIANGNYGAIARAPEKVEVSLPSPTPSSDPSTNGCSIEAPKNPFTRQNLATDRRIFQSPASIATTNLSSQIPATNTAVRQQHTVIPSSKQLTGTTVSQYSLPKATNIIHEKQPVHSSAYAQTQFSDRGLAMRNTITANVSSVGAHSPLAIRADGISNIKPILPNSNIQEGSSNSFQQPTSRSATQQQRHTHMMPHQPHFAEPSYQNPVHPYQPQFERSGPVSDLRRVRQDIPPIYHSQRNHNTMVGGSMQSGSWDTNNHGREGYESWSPENSPTRNPPRYAPGRNLPESRNHVRNHRPEWSRQRGSSGHWDPGRHENRKWHDQRR*	1008

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g3405	1007	ProSiteProfiles	'Homeobox' domain profile.	66	126	IPR001356	GO:0003677
	Mtr7g3405	1007	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	1	1007	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	843	874	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	971	1007	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	701	725	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	703	725	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	843	1007	-	-
	Mtr7g3405	1007	PANTHER	HOMEOBOX PROTEIN LUMINIDEPENDENS	1	1007	-	-
	Mtr7g3405	1007	SMART	HOX_1	68	130	IPR001356	GO:0003677
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	403	428	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	312	341	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	917	956	-	-
	Mtr7g3405	1007	MobiDBLite	consensus disorder prediction	375	428	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g3405	10	730	Homeobox Transcription Factor Family	AT4G02560	48.557	0.0	640

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g3405	-		-	gmx:100806633	1328.92