Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3358 ATGGAGTACTCAAATAATAGTAATGTTACAGCGTTTGTTATGTTTTTGTTCCTTGCAGCACTCATGTGTTCCTCTTCCCATGTTATTGTATCAAAGGATGGGAATACAGGAAATTATACAAGCTTGGCTGAAGCTGTTAAGAATGCCCCAGATTTAAGCGACCAACCTTACATCATTCGTGTTTTAGCGGGCATTTATGAAGAGTGCGTTCTCATTCCACCAAATAAGCCTAATATTAAGCTCCTTGGTGATGGTTCAAACCAGACAATCATTGTTTGTCACCAAAATGGTTCCGTCGGTACCATAGACGTCCGTGGAGAAGGGCTCATAGCTCAAGACATTGGATTTGTGAACTCAGCGGGGACAGATGCAGGTCCTGCAATGGCCGTTCGAAACGAGGCAAACAATAGTATATTCCTTCGGTGCTCCATTCAAGGATTCCAAGACACCTTATTTGCTGTTTCCGGAAGACAATTCTACAAAAACTGTGAAATATATGGTACCGTCGACTTCATCTTCGGCAACGCTGCAGCTGTATTTCAAGACTGTATGGTTTATGCACGCTATCGACAGTTCGTGGTATTCACCGCACAATCACGTGGAAATCCATCTGAAAAAACAGGTTTCACATTCCAACATTGTAATTTCACCATGTCACCTGAAGATGAAGGCAAAAAATCAGAGGTGCGTGGAACATTGGGTCGTCCTTGGAGGGCATATTCCACAGTGGCTATATTGCAATGTTTCATAGATTCCTTTGTGGATACTAGAGGTTGGGAACAGATGGAGGGACAACCCAATGATAAGGTTACTTATGTGGAGTTTGAGAATGTTGGACCTGGATCTAACACTGATGGTAGAGTGAATTGGCCTGGTGTTAAAGTTATTCGCAACTCGGACCAAGCACTCCCGTTCACTGCTTCATATCTCTTGGATGCTGACTCTTGGATTCCTTCTAAGGATGTTCCCTATGATAGTGGACTATAG 987 0.4306 MEYSNNSNVTAFVMFLFLAALMCSSSHVIVSKDGNTGNYTSLAEAVKNAPDLSDQPYIIRVLAGIYEECVLIPPNKPNIKLLGDGSNQTIIVCHQNGSVGTIDVRGEGLIAQDIGFVNSAGTDAGPAMAVRNEANNSIFLRCSIQGFQDTLFAVSGRQFYKNCEIYGTVDFIFGNAAAVFQDCMVYARYRQFVVFTAQSRGNPSEKTGFTFQHCNFTMSPEDEGKKSEVRGTLGRPWRAYSTVAILQCFIDSFVDTRGWEQMEGQPNDKVTYVEFENVGPGSNTDGRVNWPGVKVIRNSDQALPFTASYLLDADSWIPSKDVPYDSGL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3358 328 Pfam Pectinesterase 27 313 IPR000070 GO:0030599|GO:0042545
Mtr7g3358 328 PANTHER PECTINESTERASE 10 327 - -
Mtr7g3358 328 ProSitePatterns Pectinesterase signature 2. 165 174 IPR033131 -
Mtr7g3358 328 PANTHER PECTINESTERASE 10 327 - -
Mtr7g3358 328 SUPERFAMILY Pectin lyase-like 22 326 IPR011050 -
Mtr7g3358 328 Gene3D - 23 328 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3358 Mtr-Chr7 50714245 50717914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3358 26 328 Carbohydrate Esterase AT1G11590 42.994 3.25e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3358 - K01051 gmx:102665195 411.379