Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3348 ATGGTGAAGGGACGTCAAGGAGAGCGAGTCAGGCTTTATGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAAGTAAACCAGTACCCAAACACATCTCTGGTCCAAATTGAAGGAGTGAACACCAAAGAAGAGGTAGCTTGGTATGCCGGCAAGAAAATGGCATATATCTACAAGGCCAAGGTGAAGAAGAACGGAACCCATTACCGTTGCATATGGGGCAAGGTTACAAGGCCTCATGGTAACAGTGGTATTGTTCGTGCCAAATTCAAATCAAATCTTCCTCCCAAATCAATGGGATCTCGCGTAAGAGTATTTATGTACCCAAGTAACATATGA 339 0.4395 MVKGRQGERVRLYVRGTILGYKRSKVNQYPNTSLVQIEGVNTKEEVAWYAGKKMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGSRVRVFMYPSNI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3348 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Mtr7g3348 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Mtr7g3348 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Mtr7g3348 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Mtr7g3348 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Mtr7g3348 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Mtr7g3348 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3348 Mtr-Chr7 50623500 50631859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3348 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.964 1.20e-74 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3348 K02917 - jre:108991888 228.024