Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3340 ATGGAGGATGGAAAAAGTGGATTATGGAGAACGAAATCGGAACAACTAGAGTCAGTGGTAGAAGATTTGACGTCCACACCGGGATCAAGTGAGTCGGTCGGAGTGGCGGACGGTGGTAGTGGGAGTCTTACTAGAAAATCAAGGAGGGCATCCCCCGGTGGAAGAAATACACACATAAGGAAGGCGAGGAGTGTCCAGACTTCTTTGAAGGTTGATTTGGATGAGGTTAATAGTGGTGCTGCTCTTAGTAGAGCTTCAAGTTTGGGACTCTCATTTTCCTTTACTGGATTCTCTGTTCCTCTTGATGAAATCTCTAACTCCAAACCCTTCAGTGATGAAGATATCCCTGAGGATATTGAAGCTAGAATTCATAAGCCAAAGTTTCAAACAGAACCTACTCTGCCAATATATCTAAAGTTCACGGATGTGACATACAAGATAGTGATTAAAGGCATGACAACAAATGTTGAAAAAGATATCTTGAAAGGGATCACTGGTTGTGTAAATCCAGGGGAAGTTTTAGCATTGATGGGTCCCTCAGGAGGTGGTAAAACTTCTTTGTTAAATCTACTTGGAGCTAGGTTAAGTCAACCAAATATTGGTGGCTCTATAACTTACAATGATCAACCATATTCCAAGTTCCTAAAAAGCAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAAACATTGACATATGCAGCTCGTTTAAGGTTGCCAAAAACATTAACCAAAGAGCAGAAGGAACAAAGAGCTTTAGATGTTATCTATGAGCTAGGATTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTTTGTCCGAGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGAAATGAGATTATAATCAATCCTTCTCTTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGAATAGTCCAGATGCTACATGATATAGCTGAGGCTGGTAAAACTATAATAACAACAATCCATCAACCATCAAGCAGACTTTTTCACAAGTTTGATAAGTTGATCCTTTTGGGAAAAGGGAACTTACTTTACTTTGGAAAAGCATCAGAAGCAATGGACTACTTCAAACTTATAGGGTGCAATCCTCTCATTACCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACATGATTGATATTTCTGTACCATCAGAGTTAAATGATAAAGTGCATATGGGAAATGCTGAAACTGAAACTTTTAATGGGAAACCATCAGCTGCAGTTATACAAGAGTATCTAGTGGAGGCATATGAGACTCGAGTAGCAGAAACAGAGAAGAAAAAGCTAATGGTTCCAATTCCACTTGATGAAGAAGTGAAGTCTAAGGTTCGTTCACGTAAAAGACAATGGGGAGCAAGTTGGATTGAACAATTTTTAATATTGTTTTCCAGAGGATTCAAAGAACGGAGACATGACTATTTTAGCTGGTTGAGAATCACACAAGTTCTTTCCACTGCTGTCATCCTTGGATTACTATGGTGGCAATCAGATGCTAGCAACCCAAAGGGTCTTCAAGATCAGGCAGGATTGCTTTTCTTTATTGCGGTGTTTTGGGGATTTTTTCCTGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCCATGTTGAATAAGGAAAGAGCATCAGATATGTACAGATTAAGTGCATACTTTGTGGCTAGAACTACAAGTGATCTTCCACTAGACCTTGTATTACCGGTGCTTTTCCTCCTAGTTGTTTATTTCATGGCTGGTCTGAGACTCAGTGCAGGGTCCTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATTGTTGCAGCTCAGGGACTTGGACTTGCTATTGGAGCTACACTAATGGACTTGAAAAGGGCAACAACTTTGGCTTCAGTAACTGTCATGACTTTTATGTTGGCTGGGGGTTTCTTTGTAAAGAAAGTCCCAATATTCATATCTTGGATTCGATACCTATCTTTCAACTACCATACATACAAACTTTTGCTCAAGGTACAATATGAACACATTACACCTAGCATCAATGGGATGAGAATTGACAGTGGTATGAATGAGGTTGTTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTATTGGCATATTTTTCTCTGCGGTGGATGAAAATTCAACCTTAG 2199 0.3988 MEDGKSGLWRTKSEQLESVVEDLTSTPGSSESVGVADGGSGSLTRKSRRASPGGRNTHIRKARSVQTSLKVDLDEVNSGAALSRASSLGLSFSFTGFSVPLDEISNSKPFSDEDIPEDIEARIHKPKFQTEPTLPIYLKFTDVTYKIVIKGMTTNVEKDILKGITGCVNPGEVLALMGPSGGGKTSLLNLLGARLSQPNIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTKEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEAGKTIITTIHQPSSRLFHKFDKLILLGKGNLLYFGKASEAMDYFKLIGCNPLITMNPAEFLLDLANGNMIDISVPSELNDKVHMGNAETETFNGKPSAAVIQEYLVEAYETRVAETEKKKLMVPIPLDEEVKSKVRSRKRQWGASWIEQFLILFSRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDASNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERASDMYRLSAYFVARTTSDLPLDLVLPVLFLLVVYFMAGLRLSAGSFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYLSFNYHTYKLLLKVQYEHITPSINGMRIDSGMNEVVALIAMVFGYRLLAYFSLRWMKIQP* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3340 732 ProSitePatterns ABC transporters family signature. 284 298 IPR017871 GO:0005524
Mtr7g3340 732 CDD ABCG_EPDR 135 366 - -
Mtr7g3340 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 138 384 IPR003439 GO:0005524
Mtr7g3340 732 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 728 - -
Mtr7g3340 732 Pfam ABC-2 type transporter 479 688 IPR013525 GO:0016020|GO:0140359
Mtr7g3340 732 SMART AAA_5 170 361 IPR003593 -
Mtr7g3340 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 377 IPR027417 -
Mtr7g3340 732 MobiDBLite consensus disorder prediction 18 37 - -
Mtr7g3340 732 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 18 728 - -
Mtr7g3340 732 Pfam ABC transporter 161 312 IPR003439 GO:0005524
Mtr7g3340 732 MobiDBLite consensus disorder prediction 1 61 - -
Mtr7g3340 732 Gene3D - 137 378 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3340 Mtr-Chr7 50540801 50549136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3340 160 370 Calmodulin-binding Proteins AT2G36910 29.032 1.58e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3340 K05681 - pop:7488069 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3340 7 50540801 50549136 Mtr7g3340 7 50540801 50549136 ECH
Mtr7g3340 7 50540801 50549136 Mtr1g1887 1 27986807 28016436 PCT