Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3334 ATGATTGTGCCCCTTCATTCCTTACCCTTTCTATATTTTTCCTCAACGAAGACCTCAAAGATGGAAACCAATGCTGAAAATCATATGACATCGGCTGCGGCTTTTGTTGAAGGCGGCATTCAAGAGTCTTGTGATGATGCTTGCTGCATATGCCTTGAAGAGTTTTGTGATAATGATCCTTCAACTGCTACTGCTTGCCGGCACGAGTTTCACCTGCAATGCGTCCTGGAATGGGGTCAAAGAAGCTCCCAATGTCCTATGTGTTGGCAACCTATTAGCTTGAAAGATCCTACTGGTCAAGAATTGTTTGAGGCAGTAGAGCAAGAGAGAAAGTGGAGGGTTACTCCATCAAGGAATATTGATATCTTTCATAGCCCGACTCTTGGAGGTTTTGGATTTCAACATCTACACATGGGCGTCAATGGTTCTTCTTTAGAAGAGAGATTGCTTCAAAATTTAGCGATTGTTGCATCAATCGGAAGAACACATCATGTTGGTCGAAGGGAAGGACAACAAATTCGACCATCTGGTCATGAAAGAGAAGACAATCTAAATGCAATTCATATGAGCAGTCAATCTACTCCAATAACATCTAGTGAAGATGAACCATTACAACAAATACTAAAACGTCAAACTGAAGGTTCCTCAACTTCTCGATCAACCGTCACGGAAACAAATGACCAAGAAACTTACTCCAATGATAGAGACTGTGTTGCTAATTCTTCTCCAATAAACCAAAATAGAGAAAGGTCATCAGAATTCCATTCATTTTCAGATACTTTGCGGTCCAAACTCAATGCAGTGTCAATGAGATATAAAGAGTCAATTTCAAATGGTACAAGGGGTTGGAAGGAGAGGTTGTTCTCTCGAAGTTCGACCATGTCAGAATTTGGTTCAAATTCAAGAAAAAGGTGA 915 0.4066 MIVPLHSLPFLYFSSTKTSKMETNAENHMTSAAAFVEGGIQESCDDACCICLEEFCDNDPSTATACRHEFHLQCVLEWGQRSSQCPMCWQPISLKDPTGQELFEAVEQERKWRVTPSRNIDIFHSPTLGGFGFQHLHMGVNGSSLEERLLQNLAIVASIGRTHHVGRREGQQIRPSGHEREDNLNAIHMSSQSTPITSSEDEPLQQILKRQTEGSSTSRSTVTETNDQETYSNDRDCVANSSPINQNRERSSEFHSFSDTLRSKLNAVSMRYKESISNGTRGWKERLFSRSSTMSEFGSNSRKR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3334 304 MobiDBLite consensus disorder prediction 209 251 - -
Mtr7g3334 304 SMART ring_2 48 88 IPR001841 -
Mtr7g3334 304 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 16 303 - -
Mtr7g3334 304 SUPERFAMILY RING/U-box 40 95 - -
Mtr7g3334 304 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 16 303 - -
Mtr7g3334 304 ProSiteProfiles Zinc finger RING-type profile. 48 88 IPR001841 -
Mtr7g3334 304 MobiDBLite consensus disorder prediction 209 253 - -
Mtr7g3334 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 97 IPR013083 -
Mtr7g3334 304 Pfam Ring finger domain 47 88 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3334 Mtr-Chr7 50497411 50500513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3334 45 96 C3H Transcription Factor Family AT4G00335 44.231 1.99e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3334 K19043 - gmx:100819110 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3334 7 50497411 50500513 Mtr7g3334 7 50497411 50500513 ECH