Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3331 ATGGGAAACAACTGTGTTGGACTCAGAAATACCTCCGATGAAATTTTTTCAACATCGTGTTGCTGCTCATGGTCATATCCAATCTACCAAACACAAATTTCAGTTTCACCAAACATAAACGCTTCACAGACGGTTCAACAAAGTCCACCGCATGTCGACATCAAAGATTTGAAGTCAATTGAATCTAGGGTAACAGCAAAAAGTGCAGGTCTTCGAGAAGAATCAATTTTGTTGTCAAACAATGGTTCTTTTAAGGAATACTATGAGTTAGGAGATGAACTTGGAGAAGGGGAATTTGGAACTACTTCACTTTGTTTGGAGAAATCAACCGGGAAAACGTATGCATGCAAGGTAATCCCAAAGGTGAAATTGTTAGAAGATGATGATGTAGAGGATGTGAGGAGGGAAATTAAGATAATGCATCACTTGGTTGGGAGTCTAAATGTGATATGTATAAAAGGAGTTTATGAAGATTCTGATGTTGTTTATATTGTCATGGAATTATGTAAAGGAGGTGAGTTGTTTGATAGGATTGTGAAAAGAGGTTACTACGCCGAACAAAAGGCCGCTAAACTTGCAAGAACTATCGTTAGTGTTGTTGAGACTTGTCACTCACGTGGAGTTATGCATTGTGATCTTAAGCCTGAAAATTTTCTTTTTGTTGATGGACATGAAGATTCAACTCTTAAAGCAATTGATTTTGGATTGTCTAGTTTCTTCAAACCAGGAGAAAAATTTAGTGATGCAGTAGGAAGTCCTTATTATATGGCACCTGAGGTTATAAGAGAGTGTTATGGGCCAGAAGCTGATGTGTGGAGTGCGGGTGTGATCATATACTTTTTCTTATGTGGAGCACCTCCATTTGATGGTGAATTGGAGCAAGAGATATTTGATAAGGTTTTACATGGTGAAATTGATTTCTCTTCGGATCCTTGGCCAAGTATTTCTGAAAGTGCCAAAGACTTGGTTAAGAAGATGCTTGATAGAGATCCTAAAACACGAATTACAGCACATGAAGCTCTAAGTCACCCTTGGGTTCAGGTTGATGAAGTTGCTCCAGACAAGCCTCTTGATTCTGCAACTTTGAGTTGTCTAAAGCAATTTTCTGCTATGATAAAGATGGAGCATTCTCTTATTTCGATCAATATGGAAATGGCTACATCACTCAAGACGAGCTTCAACAAGTTTGTAAAGAGCTTGGCATGA 1206 0.3839 MGNNCVGLRNTSDEIFSTSCCCSWSYPIYQTQISVSPNINASQTVQQSPPHVDIKDLKSIESRVTAKSAGLREESILLSNNGSFKEYYELGDELGEGEFGTTSLCLEKSTGKTYACKVIPKVKLLEDDDVEDVRREIKIMHHLVGSLNVICIKGVYEDSDVVYIVMELCKGGELFDRIVKRGYYAEQKAAKLARTIVSVVETCHSRGVMHCDLKPENFLFVDGHEDSTLKAIDFGLSSFFKPGEKFSDAVGSPYYMAPEVIRECYGPEADVWSAGVIIYFFLCGAPPFDGELEQEIFDKVLHGEIDFSSDPWPSISESAKDLVKKMLDRDPKTRITAHEALSHPWVQVDEVAPDKPLDSATLSCLKQFSAMIKMEHSLISINMEMATSLKTSFNKFVKSLA* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3331 401 Pfam Protein kinase domain 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3331 401 Gene3D Transferase(Phosphotransferase) domain 1 175 390 - -
Mtr7g3331 401 SUPERFAMILY Protein kinase-like (PK-like) 86 354 IPR011009 -
Mtr7g3331 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Mtr7g3331 401 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Mtr7g3331 401 CDD STKc_CAMK 88 345 - -
Mtr7g3331 401 Gene3D Phosphorylase Kinase; domain 1 90 174 - -
Mtr7g3331 401 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 394 - -
Mtr7g3331 401 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 51 394 - -
Mtr7g3331 401 ProSiteProfiles Protein kinase domain profile. 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3331 401 SMART serkin_6 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3331 Mtr-Chr7 50473513 50475552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3331 30 384 EF-hand Containing Proteins AT3G10660 63.662 2.42e-162 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr7g3331 Pkinase 7.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3331 K13412 - gmx:100814475 474.167