Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3330 ATGGGAAACAACTGTGTTGGACCTAGAAGAACCTATGAACATGAAAGTTTTCAAACTTCATTTTGGTGGCCATGGTCATTGTCATGGTCATATCCAATCAACCAAACACAAATTTCAGTTTCACAAAACACAAATTCTTCACAAACCTATCAACAAAACCCACCACATGTTCACAAAATTGAGAACAAAGACATGAAGACACTTCAGTCTAATACTGCTTCAGACAGACAAACTAGCATATCACAAGAAGATGCAGAACCAGTTACACAGTTGAAGGAAAAAGCTACACCAACAAAAACAATGATGTCAAAAAATATTAATATTAGGAGGGTAACACCAAAAAGTGCAGGTCTTCGAGCAGAATCGGTTTTGTTGACAAACAATGGTCCTTTTAGGGAATTTTATAAGTTAGGAGATGAACTTGGGAAAGGAAAGTTTGGAACTACTTCACTTTGTTTGGAGAAATCAACCAGGAAGACATACGCATGCAAAGCAATACCAAAGGTAAAATTGTTTAGAGAGAATGATATAGAGGATGTGAGGAGGGAGATTGAAATAATGCATCACTTAGTTGGGATTCCAAATGTGATATCAATAAAAGGAGCTTATGAAGATCCGGTCGTTGTTTATATTGTAATGGAATTATGTGAAGGAGGTGAGTTGTTTGACAGGATTGTGGAAAGGAGACATTACACCGAGAGAAAGGCTGCTAAACTCGCAAGAACGATTGTTAATGTTGTTGAGGCTTGTCACTCACGTGGAGTTATGCATCGTGATCTTAAGCCTGAAAATTTCCTTTTTGTTGATGGAGATGAAGATTCCACTCTTATGGCAATTGATTTTGGACTGTCCATTTTCTTCAAACCAGGGGAAAAATTTAGTGATTTTGTCGGAAGTGCTTATTATGTTGCACCTGAGGTTATAGAAGAGTGTTATGGGCCAGAAGCTGATGTATGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAACACCTCCCTTTTATGGTGAATTGGATCGAGAGATATTTGATGAGGTTTTACATGGTGAAGTTGATTTCTGTTCCGATCCTTGGCCAAGTATATCTGAAAGTGCCAAAGACTTGGTTAAGAAGATGCTTGATAGAGATCCTAAAACACGAATTAAAGCTCATGAAGTTCTAAGTCACCCTTGGATTCAGGTTGATGGAGTTGCTCCAGACAGGCCTCTTGATTCTGCAACTTTGAGTCGTCTAAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATCGCAAAAAATCTTTCTGAAGAAGAAATTTCTGGGTTGAAAGAATCGTTTAAGACGATAGATACAGACAATACTGGTCAAATTACCTTTGAAAAACTCAAGGTTGGACTGAAAAAGTTTGGTGCCAATCTCTCTGAATCCGAAATTTTTGATCTAATGCAAGCTGCAGATATTGATAACAATGGCATGATTGACTATGGAGAATTCATAGCTGCAACGTTGCATTTAAACAAAGTTGACAAAGAAGATCATTTAGTTGCAGCTTTCTCATATTTTGATAAAGATGGAAATGGCTACATCACTCAAGACGAGCTTCAACAAGTTTGTAAAGAATTTGGTATGAAGGATGTCCACTTTGAGGAAATGATCCGAGAAGCTGATCAAAATAATGATGGACAAATAGACTACAATGAATTTGTGGCTATGATGCAGAGAGGCAATGCAGATTTAGAAAATAATAGTGTAAAGTGTAGCACTAGCTTTAACATTGGATTAGGGAAGACAAAGACACTATCAATATGTTAG 1809 0.3731 MGNNCVGPRRTYEHESFQTSFWWPWSLSWSYPINQTQISVSQNTNSSQTYQQNPPHVHKIENKDMKTLQSNTASDRQTSISQEDAEPVTQLKEKATPTKTMMSKNINIRRVTPKSAGLRAESVLLTNNGPFREFYKLGDELGKGKFGTTSLCLEKSTRKTYACKAIPKVKLFRENDIEDVRREIEIMHHLVGIPNVISIKGAYEDPVVVYIVMELCEGGELFDRIVERRHYTERKAAKLARTIVNVVEACHSRGVMHRDLKPENFLFVDGDEDSTLMAIDFGLSIFFKPGEKFSDFVGSAYYVAPEVIEECYGPEADVWSAGVIIYILLCGTPPFYGELDREIFDEVLHGEVDFCSDPWPSISESAKDLVKKMLDRDPKTRIKAHEVLSHPWIQVDGVAPDRPLDSATLSRLKQFSAMNKLKKMALRVIAKNLSEEEISGLKESFKTIDTDNTGQITFEKLKVGLKKFGANLSESEIFDLMQAADIDNNGMIDYGEFIAATLHLNKVDKEDHLVAAFSYFDKDGNGYITQDELQQVCKEFGMKDVHFEEMIREADQNNDGQIDYNEFVAMMQRGNADLENNSVKCSTSFNIGLGKTKTLSIC* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3330 602 CDD EFh 441 500 IPR002048 GO:0005509
Mtr7g3330 602 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 579 - -
Mtr7g3330 602 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Mtr7g3330 602 CDD STKc_CAMK 134 392 - -
Mtr7g3330 602 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 32 579 - -
Mtr7g3330 602 Pfam Protein kinase domain 135 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3330 602 Pfam EF-hand domain pair 453 503 IPR002048 GO:0005509
Mtr7g3330 602 SMART efh_1 512 540 IPR002048 GO:0005509
Mtr7g3330 602 SMART efh_1 476 504 IPR002048 GO:0005509
Mtr7g3330 602 SMART efh_1 546 574 IPR002048 GO:0005509
Mtr7g3330 602 SMART efh_1 440 468 IPR002048 GO:0005509
Mtr7g3330 602 ProSiteProfiles Protein kinase domain profile. 135 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3330 602 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Mtr7g3330 602 ProSitePatterns EF-hand calcium-binding domain. 555 567 IPR018247 -
Mtr7g3330 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Mtr7g3330 602 SMART serkin_6 135 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3330 602 Gene3D Phosphorylase Kinase; domain 1 125 211 - -
Mtr7g3330 602 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Mtr7g3330 602 Gene3D Transferase(Phosphotransferase) domain 1 212 404 - -
Mtr7g3330 602 ProSiteProfiles EF-hand calcium-binding domain profile. 546 577 IPR002048 GO:0005509
Mtr7g3330 602 SUPERFAMILY Protein kinase-like (PK-like) 133 394 IPR011009 -
Mtr7g3330 602 CDD EFh 512 572 IPR002048 GO:0005509
Mtr7g3330 602 Pfam EF-hand domain pair 512 572 IPR002048 GO:0005509
Mtr7g3330 602 Gene3D - 405 577 - -
Mtr7g3330 602 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Mtr7g3330 602 ProSiteProfiles EF-hand calcium-binding domain profile. 508 543 IPR002048 GO:0005509
Mtr7g3330 602 SUPERFAMILY EF-hand 432 575 IPR011992 -
Mtr7g3330 602 MobiDBLite consensus disorder prediction 69 86 - -
Mtr7g3330 602 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Mtr7g3330 602 MobiDBLite consensus disorder prediction 69 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3330 Mtr-Chr7 50464050 50468054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3330 1 593 EF-hand Containing Proteins AT5G04870 60.848 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr7g3330 Pkinase 6.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3330 K13412 - gmx:100814475 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3330 7 50464050 50468054 Mtr1g1521 1 18893644 18916562 PCT
Mtr1g1905 1 28267680 28271958 Mtr7g3330 7 50464050 50468054 PCT