Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3309 ATGGCAACGTACTATCATGGTGGTAATTCTGAAATCCAATCAAGTGGTGGCGGCGGCGCCGACGGACTTCAAACACTTGTTCTCATGAATCCAAGCTATATACAATATTCTGATGCTTCACAGCAACAACAAGCTCAACAACCTTCTCATGCCACGGCCGGTAACTATGTTTTCCTCAACTCCACAGCCGCGGAAAACAACTCCTTCTCACCTCACGCGCCACCTTCCAACACTCAACAATTCGTTGGCATACCTCTCAACCACCAACAACACCAAATCCACGCGCACCATGACGTTGTACCTTCTTTGCATGGCTTCCTTCCACACGTGCAGTACAATCAATGGAACACAATTGACCCCAACACGGCAGCGCGTGATACACCACGCGCTCAACAAGGACTGTCTCTTAGTCTCTCTTCACAGCCCGCAAGATTCGTTTCTATGTCTGGTGGTTCGCCATCTCCAGCTTCTGGTGTTACTACCAATAATAACAATGGGAATCCGGGGATTCAGATTCTGAGCTCCAAATATTTAAGGGCTGCACATGAGCTTTTAGAAGAGGTTGTGAATGTGAATAGTGGTGTTGAATTGGGTAAGAAGAGTGGTGGTGGAATGAGCAAGGTGAATATTGGAGAATCATCGGGAGTTGGTAGTGGAGGAGATGGATCAATCATTGGTGGTGCAGAGGGGAGTGGAAAACGTAGCTCTGAACTATCAACAGCTGAAAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTACCACCATCAAATGGAGATTGTTGTTTCCTCGTTCGAGCAAGCCGCCGGAATCGGCTCCGCTAGGACTTACACTGCCCTTGCACTGCAAACAATCTCAAAGCAGTTTCGGTGTTTGAAAGATGCAATAACAGGACAGATAAAAGCTACAAATAAGAGTTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATATGTTGATCATCAACTACGTCAACAACGTGCTCTACAACAGTTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTACCTGAAAGATCTGTATCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTCCACCCTTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGCCAGGTTTCAAATTGGTTTATAAATGCTAGAGTTAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACGTAGAAGAAATGAAGGAAAATGAACAAAGTAAGAGCAACGAAGATTCTTCAATGAAAATAACATCCTCTCAAGAAAAAGCTCTCACCTCTGAAACAGAACCTAAAGGTTACAACTCCACACAAGACATTTCCACAAGCCAAGACACTCCATTAATTTCTGTTTCAAGACCACAAACATCACCACTTGTTGGAAATGTTAGAAACAATTCAGGATTTAGCTTCATTGGATCATCAGAACTAGAAGGGATACCACAAGGAAGTCCTAAAAAACCAAGGAACCATGAACTTATGCATAACCCTAATAGCTTCATTGATGTGAAGCACAATGAGGCAAATAATGAGGAACTATCAATGAAATTTGGTGATGACAGACAAAATAGAGATGGTTACTCTTTTATGGGAAACCAAACAAATTTCATTGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGACTCAGAACAATTCGCACCAAGGTTTTCAAGTAATAATGTTTCACTCACTCTTGGTCTTGATTCAATACAAGGAAATCATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCATTGATATAAGTGAACCAAATGAATTTGGTTCTATAAACACTTCCTCTCCTCAATATGAAAGTATCAACATGCAAAACCCAAAAAGGTTTGCTGCACAGTTGTTACCAGATTTTGTGTCCTAA 1983 0.4206 MATYYHGGNSEIQSSGGGGADGLQTLVLMNPSYIQYSDASQQQQAQQPSHATAGNYVFLNSTAAENNSFSPHAPPSNTQQFVGIPLNHQQHQIHAHHDVVPSLHGFLPHVQYNQWNTIDPNTAARDTPRAQQGLSLSLSSQPARFVSMSGGSPSPASGVTTNNNNGNPGIQILSSKYLRAAHELLEEVVNVNSGVELGKKSGGGMSKVNIGESSGVGSGGDGSIIGGAEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKENEQSKSNEDSSMKITSSQEKALTSETEPKGYNSTQDISTSQDTPLISVSRPQTSPLVGNVRNNSGFSFIGSSELEGIPQGSPKKPRNHELMHNPNSFIDVKHNEANNEELSMKFGDDRQNRDGYSFMGNQTNFIGGFGQYPIGDIGRFDSEQFAPRFSSNNVSLTLGLDSIQGNHQTFLPNQNIQLGRSIDISEPNEFGSINTSSPQYESINMQNPKRFAAQLLPDFVS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3309 660 Pfam Associated with HOX 172 310 IPR006563 -
Mtr7g3309 660 SUPERFAMILY Homeodomain-like 360 426 IPR009057 -
Mtr7g3309 660 MobiDBLite consensus disorder prediction 439 473 - -
Mtr7g3309 660 Pfam Homeobox KN domain 376 415 IPR008422 GO:0003677|GO:0006355
Mtr7g3309 660 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 613 - -
Mtr7g3309 660 SMART prehox3 167 311 IPR006563 -
Mtr7g3309 660 Coils Coil 243 263 - -
Mtr7g3309 660 MobiDBLite consensus disorder prediction 428 473 - -
Mtr7g3309 660 Gene3D - 362 442 - -
Mtr7g3309 660 SMART HOX_1 359 423 IPR001356 GO:0003677
Mtr7g3309 660 CDD homeodomain 359 420 IPR001356 GO:0003677
Mtr7g3309 660 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 613 - -
Mtr7g3309 660 ProSiteProfiles 'Homeobox' domain profile. 356 419 IPR001356 GO:0003677
Mtr7g3309 660 MobiDBLite consensus disorder prediction 144 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3309 Mtr-Chr7 50250181 50255996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3309 1 660 Homeobox Transcription Factor Family AT2G35940 47.193 4.95e-170 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mtr7g3309 POX 7.3e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3309 - - gmx:100810901 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3309 7 50250181 50255996 Mtr7g3309 7 50250181 50255996 ECH