Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3297 ATGGCCAATATGCAACCTCAATTGAACGACGCTAACTACTGGTCTACCATTCCATTGGCACCAGGACAATCCAGCAGCTACAACCAAAGCAACCATAGAAGTTGTTGTAGTTATCTCTGCAGCATCTTTTGGAAGCTTCTGCTTGCACTCGTTGTCCTCTTTGGTCTCATAATCCTTATCTTCTTTCTCATTGTTCAACCCCGCGCCTTCAAGTTCTATGTTACTAAAGCCGAACTAACACAATTTGACTACACAAACAACACACTACACTACGACATGGTGCTCAATTTCACAGCACACAACCCAAACAAAAAACTTAGCATCTATTACGATAAAGTTGAAGCTCGAGCTTTCTATGAAGGATCGAGATTTGCAAATGTCGATGTGATCACACACATGAACTCGTTTCGCCAAAACAAGAAAACTAGTGACCCCATGAGTGGCGTTTTCTTAGGACAAAAGTTGTTGGTACTCGACAATGATCAAGTCTCGGAATTCAGCAAAGACAAGAGTGTTGGAGTTTATGGTATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAAACTTGGAGACTCGATATCTCGCACATACAAGCCTAAGGTCAAATGTGACCTCAAAGTTCCATTGAAATCAAACAATAATGCAACCTTTACCTTCACCCGGGTTTTGCCCGAAAAATGCAATGTTGTGTTCTAG 696 0.4152 MANMQPQLNDANYWSTIPLAPGQSSSYNQSNHRSCCSYLCSIFWKLLLALVVLFGLIILIFFLIVQPRAFKFYVTKAELTQFDYTNNTLHYDMVLNFTAHNPNKKLSIYYDKVEARAFYEGSRFANVDVITHMNSFRQNKKTSDPMSGVFLGQKLLVLDNDQVSEFSKDKSVGVYGIYVKLYFRIRFKLGDSISRTYKPKVKCDLKVPLKSNNNATFTFTRVLPEKCNVVF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3297 231 PANTHER OS05G0367900 PROTEIN 21 229 IPR044839 GO:0098542
Mtr7g3297 231 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 229 - -
Mtr7g3297 231 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3297 Mtr-Chr7 50073822 50074708 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3297 64 223 SNARE and Associated Proteins AT1G32270 33.333 3.54e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3297 - - gmx:100807701 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3297 7 50073822 50074708 Mtr7g3297 7 50073822 50074708 ECH
Mtr7g3297 7 50073822 50074708 Mtr1g1959 1 29059592 29060595 PCT