Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3296 ATGCAACCTCAATTAAGCGATTCTTACTATGGACCTGCCATTCCACCGACACGAGGGCAATCCCGCAATCGCCACCACCGTGGCAGAAGCTGTTTCAGCTGTCTCTTCAGCATCTTTTGGAAGCTTATAATTGCTCTTATTGTTCTCTTTGGTCTCATAATCCTTATCTTCTTTCTCATTGTTCAACCCCGTGCATTCAAGTTCTATGTTACGAAAGCCGAACTAACACAATTTGACCACACAAACAACACACTATACTACAACATGGTGCTCAACTTCACATCCCACAACCCAAACAAAAAACTTGGCATCTACTACGACAAAGTTGAAGCTCAAGCATTCTATGAAGGGTCGAGGTTTTCTAATGTAGATGTTATCACACACATGAACTCATTTCGTCAAGACAAGAAGAATAGCAATCCCATGACCGGTGTTTTTTCTGGTCAAAAACTATTGATGCTCGACAATGATCAAATTTCGGAGTTCAACAAAGATAAGAATGTTGGAGTTTATGATATCTATGTGAAGCTCTACTTTAGGATTAGGTTTAAACTTGGAGACTCCATATCCAGAAAGTTCAAACCTAAGGTCAAATGCGACCTCACAGTTCCTTTGAGCACTCGTAATGCAACTGACTTTACCTTCATTCGACTTATACCCACCAAGTGTGATGTTGAGTTCTAA 684 0.405 MQPQLSDSYYGPAIPPTRGQSRNRHHRGRSCFSCLFSIFWKLIIALIVLFGLIILIFFLIVQPRAFKFYVTKAELTQFDHTNNTLYYNMVLNFTSHNPNKKLGIYYDKVEAQAFYEGSRFSNVDVITHMNSFRQDKKNSNPMTGVFSGQKLLMLDNDQISEFNKDKNVGVYDIYVKLYFRIRFKLGDSISRKFKPKVKCDLTVPLSTRNATDFTFIRLIPTKCDVEF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3296 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Mtr7g3296 227 Pfam Late embryogenesis abundant protein 93 199 IPR004864 -
Mtr7g3296 227 MobiDBLite consensus disorder prediction 1 25 - -
Mtr7g3296 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3296 Mtr-Chr7 50066683 50067444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3296 60 206 SNARE and Associated Proteins AT1G32270 35.135 1.06e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3296 - - gmx:100807701 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3296 7 50066683 50067444 Mtr1g1961 1 29066629 29067282 PCT