Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3295 ATGGCCGATAACAAGCAACCACAATTAAATGGTGCCTACTATGGACCCGCCATTCCACCACCAGCACAACCTCGCCCTCGCAGCCACCGAAGCAGAAGTTGTTGTTGCTGTCTCTTCAGTTTCTTCTGGAAGCTTTTAATTGCGCTCATAGTTCTTGCTGGCCTCGCAGTCCTTATCTTCTATCTCGTTGTACAACCCCGCGGCTTCAAGTTCTATGTCGACGAAGCCAATCTAACTGAATTCGACTACAGCAACAATACACTAAACTACAACATGGTGCTCAACTTCACAGCACGTAATCCAAACAAAAAACTCAACATCTATTATGATAAAGTGGAGGCACGAGCATTCTACGAAGGGTCAAGGTTTGCCAATGTTGATGTGATCACACACATGAACTCATTTCGCCAATACAAGAAGAGCAGCAACCCCATGAGTGCTGTTTTCTCAGGACAACATGTTTTCGTGCTCGACAGCGATCAAGTCTCCGAGTTTAACAAAGACAAGAGTGATGAAGTTTATGATATCTATGTGAGGCTTTACTTTAGGATTAGGTTCAGACTTGGGGATTTGATATCGGGTGATTACAAGCCTAAGGTGAAATGTGACTTCAAAGTTCCTTTGAGTTCTAAAATTAGCAATGCAACATTCACTAGGACCAAGTGTGATGTTGATTTCTACTAA 684 0.4313 MADNKQPQLNGAYYGPAIPPPAQPRPRSHRSRSCCCCLFSFFWKLLIALIVLAGLAVLIFYLVVQPRGFKFYVDEANLTEFDYSNNTLNYNMVLNFTARNPNKKLNIYYDKVEARAFYEGSRFANVDVITHMNSFRQYKKSSNPMSAVFSGQHVFVLDSDQVSEFNKDKSDEVYDIYVRLYFRIRFRLGDLISGDYKPKVKCDFKVPLSSKISNATFTRTKCDVDFY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3295 227 Pfam Late embryogenesis abundant protein 96 197 IPR004864 -
Mtr7g3295 227 PANTHER OS05G0367900 PROTEIN 21 224 IPR044839 GO:0098542
Mtr7g3295 227 MobiDBLite consensus disorder prediction 1 25 - -
Mtr7g3295 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3295 Mtr-Chr7 50060986 50061978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3295 63 221 SNARE and Associated Proteins AT1G32270 33.750 3.29e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3295 - - gmx:100807701 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3295 7 50060986 50061978 Mtr1g1962 1 29124421 29125373 PCT