Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3292 ATGGTCACTGACAAATGGGAGCAGGAAGTATCTCTAAGGTATCCAAGCCTCAAATCTCTTAGCACTCACTTTAAAGATCAATGCTTTGGAAAGCCAGAAACACTCTGTAGAAGCATCTCAGCTAACGAATTTGCTGAGAAAGGAAACTCATGGAGTTTTTGGGTCTCTCCTCCTATGAGCCCAGTTATCAATGATGCTGCTACTAGTTTGGTTCCCAAGCAGGGTTCATGTTGGTCTGAGATCAAATTCACTGGTATGGTGCAGTGGGGCCAACGCCAACAAGTTCGGTTCTTGGGGCGTCATGAGGAGCAAAAGGTTGAACCTTTACCTCCACTTCAGAAGGAAAAACCTTTCCATTTTAAGGCCAGAGATGGGACTAATGTGAAGAAGAGAAAGAACAAAATGGAAGAAGCTGTCAAGGTAGCTCAGTTTGAGGTACAGAGGACAACTCGTCAATGCAACAAAAATCAACAAGGTGTGAGTAGTAGCAGCGGAGCCAAAAAATCTAAGAAAGCAGTGAATGACACCAAGAAGCAGGAACTCGTGGTTTATAGCAGAAACAAGCCAAAACTAGGGATTTATAGATGGGCTGCTGAGAGGTATAAGTTAGCAGAGGAGAACATGTTGAAGGTTATGAAGGAAAAAGGAGCTGTGTATGGAAACTCAATAATGAGGCAAGAGCTTAGATCAGAAGCAAGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGTTGAAACACATGGCTGGAAAAGTGGCACCAGGAGGAGTTGATAGATTCAGACGGAAACACAATGCCGAAGGTTCAATGGAATACTGGTTAGAGAGTGCTGATCTTGCTGATCTTAGAAAGGAATTGGGTCAAGACCCCTACTGGACTCCTCCCCCTGGCTGGAAGCCTGGAGACAGCATTGCACCAGAATATGTTACTAGTAATGAACTCAGAGAGATCATAAAGGAGGAAATAATTAAGTTGAAACGTGAAATGAGGGAGCTAAAATCAAATAGAAAAGCATTGGCTATGTCAAATTTGAATTTTTCCCAGGTTTCTAAGCAGGATATTTATTTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAGCTAAAAGAAATTTCTTTGGCATTGAATGGCATGGAGGATCAAATGGGAATGCTGAAACCAACACTAGTAGAAGAACCACCAGCGTCATTGCTTGGACCAACATCATTGACAGAAAACATTGGACATGAGACAAGGGAGGAAGAGAAAGGTACTAACGTGAACAAAACAAAATCAGCAGACACACAAATGGTAGTAGGAAGCAGAGGACAAAACAAGAGGGACCTTTATGTGGTCAAATACGAGTTTGTATCCACATGTTGTAACCAACCTTGA 1380 0.4196 MVTDKWEQEVSLRYPSLKSLSTHFKDQCFGKPETLCRSISANEFAEKGNSWSFWVSPPMSPVINDAATSLVPKQGSCWSEIKFTGMVQWGQRQQVRFLGRHEEQKVEPLPPLQKEKPFHFKARDGTNVKKRKNKMEEAVKVAQFEVQRTTRQCNKNQQGVSSSSGAKKSKKAVNDTKKQELVVYSRNKPKLGIYRWAAERYKLAEENMLKVMKEKGAVYGNSIMRQELRSEARKYIGDTGLLDHLLKHMAGKVAPGGVDRFRRKHNAEGSMEYWLESADLADLRKELGQDPYWTPPPGWKPGDSIAPEYVTSNELREIIKEEIIKLKREMRELKSNRKALAMSNLNFSQVSKQDIYLELVHKKAKIEEQLKEISLALNGMEDQMGMLKPTLVEEPPASLLGPTSLTENIGHETREEEKGTNVNKTKSADTQMVVGSRGQNKRDLYVVKYEFVSTCCNQP* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3292 459 Coils Coil 316 343 - -
Mtr7g3292 459 MobiDBLite consensus disorder prediction 395 435 - -
Mtr7g3292 459 MobiDBLite consensus disorder prediction 409 423 - -
Mtr7g3292 459 Coils Coil 363 383 - -
Mtr7g3292 459 MobiDBLite consensus disorder prediction 150 175 - -
Mtr7g3292 459 PANTHER PROTEIN DYAD 1 425 - -
Mtr7g3292 459 MobiDBLite consensus disorder prediction 150 169 - -
Mtr7g3292 459 PANTHER PROTEIN DYAD 1 425 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3292 Mtr-Chr7 50030653 50034685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3292 195 283 PHD Transcription Factor Family AT5G22260 37.079 2.14e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3292 - - mtr:MTR_7g105920 914.45