Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3268 ATGTCGGTAAACCACACAATACAAGAAACAACATCACTATGGTGGAATCAACAACAACAAAGAACTCAACAAGATGCAGAAGAAGCTGAAATAGAAGATGATGTGGTTTTAGAATCAATAATGAAACTAAAAACAACAGAAGCATCATCAGAAGAAGAAGAAGAAGAGAAAGAAGCGATGTTTGAGAAACCATTAACACCAAGCGATGTAGGGAAGTTGAACCGACTCGTTATTCCAAAACAACATGCTGAGAGATATTTCCCACTAGACTCAGAAGAAATCAAAGGCTTGTTACTGAGTTTCGAGGATGAGTCAGGTAAGTGTTGGAGGTTCCGGTATTCGTATTGGAATAGTAGTCAAAGCTATGTTCTTACAAAAGGTTGGAGTCGTTATGTTAAAGATAAACGTCTTGATGCTGGTGATGTTGTTTTGTTTCAAAGACACCGTATACATCCTCAAAGGTTGTTTATCTCATGGAGGCGCCGCCATGGTAGTAACTCTACTCCACCGGCTCATGTTAGCAGATCCATCTCTAGTAGTAGTACTCACGGCAATGTTCCTATGGGGTGGTCCAGAGAACTCTATCCTGCGCATCCTTATCCTACTCATCATCATCCCTTGTCATACCATGCAGGTGAAGGGTCCCAAAGTCAGAACACAGCCACACCTTGTGGAAATAGTTCGAGTACTTCCAGGGTGCTGAGGCTGTTTGGAGTGAACATGGAATGCCAACCTGATAATAATATTAATATTAACAATATTAATGATTCTCAAACTTTGTCACAAGATTGCTCTTATAATAACATGTCATCAACACAAGGCACAGCTATCCCACAATTCTACCACCACCTCCACCGTCAACCTCCTTCAAATCCTCACCATCACATGCTACGTCAACAACCATATTAG 909 0.4103 MSVNHTIQETTSLWWNQQQQRTQQDAEEAEIEDDVVLESIMKLKTTEASSEEEEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRIHPQRLFISWRRRHGSNSTPPAHVSRSISSSSTHGNVPMGWSRELYPAHPYPTHHHPLSYHAGEGSQSQNTATPCGNSSSTSRVLRLFGVNMECQPDNNININNINDSQTLSQDCSYNNMSSTQGTAIPQFYHHLHRQPPSNPHHHMLRQQPY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3268 302 Coils Coil 43 63 - -
Mtr7g3268 302 CDD B3_DNA 64 149 IPR003340 GO:0003677
Mtr7g3268 302 ProSiteProfiles B3 DNA-binding domain profile. 61 163 IPR003340 GO:0003677
Mtr7g3268 302 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 17 248 - -
Mtr7g3268 302 Gene3D - 48 172 IPR015300 -
Mtr7g3268 302 SUPERFAMILY DNA-binding pseudobarrel domain 58 163 IPR015300 -
Mtr7g3268 302 MobiDBLite consensus disorder prediction 44 66 - -
Mtr7g3268 302 SMART B3_2 61 163 IPR003340 GO:0003677
Mtr7g3268 302 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 17 248 IPR044800 GO:0003700
Mtr7g3268 302 Pfam B3 DNA binding domain 61 162 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3268 Mtr-Chr7 49745070 49747229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3268 54 260 RAV Transcription Factor Family AT5G06250 50.679 2.32e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr7g3268 B3 5.2e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3268 - - cam:101494766 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3268 7 49745070 49747229 Mtr7g3268 7 49745070 49747229 ECH
Mtr7g3268 7 49745070 49747229 Mtr1g1998 1 29667652 29670119 PCT