Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3264 ATGAATTACATCTCCATGGCGTCGATCACAAAAATAGTCGGCTACAATAATTCCGTATCTCCGTTTCTCCTCACTTTCCGCAGAGCTATTGCTTTCAAGCTTTTCGTTGGAGGACTTTCTTTTCACACAACAGAGAAAACTTTGTCAGATGCATTCTCAAATTATGGACAAGTTGTTGAAGCTAAAGTTATAACAGATAGGATTTCAGAGAAATCTAAAGGGTATGGTTTTGTTACTTTTGCTTCACAAGATGAAGCTGAGAAGGCCATAACAGAGATGAATGAAAAGGCACTAAACGGACGTGTTGTCTTCGTTGATTACGCAAAACCAGATACTAAACGCAGCATGGGAATGCCGATTGCCAGAGGACCTCCTGAAGATCTGAACAAACAACATACAACGGATTCTCCTCAAGACGCATGA 423 0.4066 MNYISMASITKIVGYNNSVSPFLLTFRRAIAFKLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITEMNEKALNGRVVFVDYAKPDTKRSMGMPIARGPPEDLNKQHTTDSPQDA* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3264 140 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 110 IPR000504 GO:0003723
Mtr7g3264 140 SUPERFAMILY RNA-binding domain, RBD 32 123 IPR035979 GO:0003676
Mtr7g3264 140 MobiDBLite consensus disorder prediction 115 140 - -
Mtr7g3264 140 PANTHER TRANSFORMER-2-RELATED 21 127 - -
Mtr7g3264 140 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 21 127 - -
Mtr7g3264 140 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 103 IPR000504 GO:0003723
Mtr7g3264 140 Gene3D - 28 136 IPR012677 -
Mtr7g3264 140 SMART rrm1_1 33 106 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3264 Mtr-Chr7 49696157 49698295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3264 34 124 Eukaryotic Initiation Factors Gene Family AT1G49760 35.922 1.83e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3264 - - lja:Lj1g3v4721740.1 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3264 7 49696157 49698295 Mtr7g3264 7 49696157 49698295 ECH