Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3259 ATGGACAATATGCCACCAGGTTATCGTTTCTACCCTACAGAAGAAGAACTTATTTCGTTCTATCTTCACAAAATGCTTGAAGGAGAGAAAGAATACACGATTCGTACTGTTATACCAGTCGTTAATATATACGATTACAATCCATCACAACTCCCACAAATTTCAGGAGAGGCTAGTATGAGAGACACGGAACAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAAGCGTCTCACCGACACTGGCTACTGGAAAGCCACTGGATCTCCTAATCATGTTTATTCTTCAGATAATCGCATCATTGGAGTGAAAAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAACGAGTATAAGGCCATTCAAATAGATGAAGCATCTTCTTCAAACAAAGCAGCTCCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTAAGGGCATTTGATAGACGACCACCACCAAGGAGGGTTACAACCCATGTTCAAAATGCTCAAGAGCACCAGAAAGATTCAAGTTGCGAACATGATGTTCAAATCTCGATGGACATAATTAGTGCAACAAACTCACCAGAGAGCTCTTCCTCTATAGACCATGTTCAACAACCCTCACAAGAGGTTGGAGAAGCTAGCCAAATGGATATTGCTGATTACGATGCTTTGTTGGATTGGGAGCAAGTGGATTGGTTCTTAGGGTCGGAGCCATGA 774 0.4121 MDNMPPGYRFYPTEEELISFYLHKMLEGEKEYTIRTVIPVVNIYDYNPSQLPQISGEASMRDTEQWFFFIPRQESEVRGGRPKRLTDTGYWKATGSPNHVYSSDNRIIGVKRTMVFYSGRAPNGKKTDWKMNEYKAIQIDEASSSNKAAPKLRQEFSLCRVYKKSKCLRAFDRRPPPRRVTTHVQNAQEHQKDSSCEHDVQISMDIISATNSPESSSSIDHVQQPSQEVGEASQMDIADYDALLDWEQVDWFLGSEP* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3259 257 MobiDBLite consensus disorder prediction 210 233 - -
Mtr7g3259 257 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Mtr7g3259 257 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 251 - -
Mtr7g3259 257 MobiDBLite consensus disorder prediction 173 197 - -
Mtr7g3259 257 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Mtr7g3259 257 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Mtr7g3259 257 MobiDBLite consensus disorder prediction 210 231 - -
Mtr7g3259 257 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Mtr7g3259 257 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3259 Mtr-Chr7 49660738 49662611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3259 2 251 NAC Transcription Factor Family AT5G22380 44.444 6.69e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr7g3259 NAM 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3259 - - gmx:100777948 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3259 7 49660738 49662611 Mtr7g3259 7 49660738 49662611 ECH