Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3250 ATGTTAGGGAAAAAGATTGTATCTATCAAGAAACTAGCAAAAAAGGTGAAGGTTGTAGGTAGAGTTGACTCTGACCCTGCTCACTTTAAGTTGTTGAAGGAATGTGAGGAAGAAGAAAAAAAACCAATCACAAAACAAACCGGGTCAAAAAAATGTGGTGTTTTTGCACTATATGTTGGGGAGGAACGACAGAAATATGTGGTTCCAACCAGGTACCTCTCACATCCATTATTCAAAATGTTGTTGGAGAAAGCATACAATGAATTTGGGTTTGAACAGAAGAATGGCTTGGTAGTTCCATGTAGTGTTTCAGCATTTCAAGAGGTTGTTAAGGCTATAGAATGTAATAATTGTAAGTTTGACATGGGAAATATTTTTGATGAATTGATTTGA 393 0.3588 MLGKKIVSIKKLAKKVKVVGRVDSDPAHFKLLKECEEEEKKPITKQTGSKKCGVFALYVGEERQKYVVPTRYLSHPLFKMLLEKAYNEFGFEQKNGLVVPCSVSAFQEVVKAIECNNCKFDMGNIFDELI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3250 130 Pfam Auxin responsive protein 44 112 IPR003676 GO:0009733
Mtr7g3250 130 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 129 - -
Mtr7g3250 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3250 Mtr-Chr7 49569124 49569516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3250 53 116 Calmodulin-binding Proteins AT5G20810 51.562 4.31e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3250 K14488 - gmx:100776885 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3250 7 49569124 49569516 Mtr7g3250 7 49569124 49569516 ECH