Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3219 ATGGCGGAAGAGCACCGATGTGAAACTCCAGAAGGCCACAGACTCTGCGCAAACAACTGCGGCTTCTTCGGCAGTTCAGCTACGATGAATCTCTGTTCAAAATGTTACAGAGACATTCATTTGAAGGAGCAAGAACAAGCCAAAACTAAATCAACAATCGAAACGGCTCTCTCCTCAGCCTCCGCTTCCACCGCCGTGGTCGTTGCTGCTTCGCCGGTTGCGGAAATCGAATCTCTCCCTCAACCTCAACCACCGGCGTTGACCGTACCGTCGATCGTGCCAGAAGCATCGGACAATTCATCAGGACCGGTTCAATCGAACCGGTGCGGGACGTGTAGAAAGCGGACCGGGTTAACCGGGTTCAAGTGTAGATGTGGAATTACATTTTGTGGGTCCCACAGGTATCCGGAGAAACATGAGTGCGGTTTTGATTTCAAAGCGGTGGGGAGAGAGGAGATAGCGAAAGCGAATCCTGTGATCAAAGCTGATAAGCTCAGAAGAATTTGA 507 0.5089 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKSTIETALSSASASTAVVVAASPVAEIESLPQPQPPALTVPSIVPEASDNSSGPVQSNRCGTCRKRTGLTGFKCRCGITFCGSHRYPEKHECGFDFKAVGREEIAKANPVIKADKLRRI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3219 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Mtr7g3219 168 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mtr7g3219 168 Gene3D - 88 164 IPR035896 -
Mtr7g3219 168 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mtr7g3219 168 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Mtr7g3219 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Mtr7g3219 168 Gene3D - 1 63 - -
Mtr7g3219 168 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 168 - -
Mtr7g3219 168 SUPERFAMILY AN1-like Zinc finger 97 163 IPR035896 -
Mtr7g3219 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 168 - -
Mtr7g3219 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 62 - -
Mtr7g3219 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3219 Mtr-Chr7 49290939 49292173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3219 1 168 C2H2 Transcription Factor Family AT3G52800 52.047 2.87e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3219 - - gmx:100789686 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3219 7 49290939 49292173 Mtr7g3219 7 49290939 49292173 ECH
Mtr7g3219 7 49290939 49292173 Mtr1g2045 1 30230493 30231513 PCT