Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3212 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGTAAGGGAGGACCGAAGTATAGGGAAAGGCGTTATAGAGATTTGCCAGTCCAAGTCTCAGAACAAAATGTCTGAGAAAAAAAATAAGAAGCCTTTGGCGCTGAACTTGGGATACAAGGATAAAATTGATGATGAAATTAACAAGCTGTTTGAATCAATTGCTCTTAAATCTTCGTCATGGGATTTGGGCATTTCACAAGATGGTACAAGTTATAAGCTGAAAAACACCTTAAAAAAACCGATGACAATGGGTGTTCTGCGATCTCCACAAGTTGGAACTTCTGAGGCTGTTAATTTGAAGCAGGCACTAAGAGACCTTTGTATATCTAAGGCATCAGAAGTGGCTTCCATGAAACGGCTATCGAAGTCAATAGCTTCTCCAAGAATATCAGAGGTTGAAAGGATACAGACATTGTACAGTTCGGTTGTAGATGAAGCCAGTCATTCCGGGCCTCACATTGCTGAGAGTAAAGGGCGTAGAATGGAAATATCTCTAGTGCCAGAAAAAAGCCAGTCACTCTCATTCAATAAAACATCTCAATCCCATCAAACTACCCAAATCACATCATCGAGTCAAGCCATTAATTCTGCTTGGGAAATTGCTGTTGCAACTAATCAACTTCATTCCGGGACTTCATCGTCGCGAAGTGATGCAGCATGTTTATCAAGTAGAGTTGGGTCTCAATCACAGCGTGTGGTACCTGTTCAACCAGAAAAGCAAACCCCTGCATCTTCTCCATCTCTTTCTAATACAGCTGAAAGCAAATTAGAGTTGTCTGTAAATGCTTCTTCACCTAAAAAGTTAGGTAATAAAGTGGCTGTGTCAAATTCTGGACGGAAAGGTAGGTTGCAGACATCATCTTCTTCATCTACTTCTGTTAATGGCAGCAGGGTTAACAAACAACCACACCATACCTCTCGCACAATTAAAATGGTCATTAAGAACAAAAGTCCGAGTAAGAAGAAAGTGAAGGAGGATTCAGGTTCTGCATCATGTGATCCTACATCAAATGAAGTTAGCAAGTCTGTTCCTGGCACAGCTCAGCTGGTTTGTGAAAGATGTAGGTGCGCTTTAGAAGACACAAAGGAAGAAAAAAACCAAGAGGTAATGGCCTTGGACTCTACTAGTCCTGGAAACGGAGTGAACTTCAGTAACGTGCACTCTAGTTCATATAAACCTTATTCGGCATCAAATAGTGGTAATATAGGCAAAGCAGTTGCAAAGGTGGAGAAGATTCAGAAGAACACCAAGTTGAAAGAGCAACTCGAGTTCTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACTAGTACCAGTGATGAGAGCAACATGAGTGGCTCAAGTTGCGGCAGTAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGCTCAAATGCAGCACGGAGTTTTGGGTTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCCGAACTAATTGGCACAAGTTGTTTGTTTGCTATTAAGGTCATGGACATCGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATCTTAAGGATGCTGGACCATCCGTTTCTTCCTACATTGTATGTGCAATTTACATCAGATAATCTTTCATGTTTGGTCATGGAGTATTGTCCCGGTGGAGATCTTCATGTTCTACGACAGAAGCAGCTTGGTAGATGTTTTTCAGAGCTAGCAGCAAGGTTTTATGTTGCTGAAGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCGTTGAGGTGTGCTGTTAGCCCAACACTTCTGAAGTCATCTTCTAATATTGACCCTGCAAAAGTTTCTGGTCTTGGTGCACAATCAAGTTGCATTGAGCCATTGTGCATTCAACCATCTTGTCAAGTTTCATGCTTCAGTCCCAGATTCCTACCTGCTGCTGCAAAAGCAAGAAAGTTAAAAGTCGACCCTCTCGCTCATATCAGATCACTTCCGCAGCTTGTGGCTGAGCCCACTGATGCAAGGTCAAACTCATTTGTTGGTACACATGAATACTTGGCGCCTGAGATCATCAAAGAAGAGGGACATGGTGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGAAGAACACCCTTTAAAGGTTCTAACAATGAAGAAACATTAGCAAACGTGGTGTTGCAAAGTCTTGGATTCCCTGATGACCCATTTGTCAGTTTCGAAGCTAAGGATCTGATCAGAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTTCACAGAAAGGGGCTGCGGAGATTAAACAACATCCCTTCTTCGAGGGCCTTAACTGGGCCTTAATTCGTTGCACTATCCCACCAGAACTTCCAGAGTTTTGTGATTTTGGAGTTTTAGACATGGCATCACACGGCAAGGGTGCAAAGTATTTAGAGTGTAATGTAGGACAGCACGTGGAATTCGAGTTGTTTTAA 2631 0.4227 MGSFSGTCEIVEVREDRSIGKGVIEICQSKSQNKMSEKKNKKPLALNLGYKDKIDDEINKLFESIALKSSSWDLGISQDGTSYKLKNTLKKPMTMGVLRSPQVGTSEAVNLKQALRDLCISKASEVASMKRLSKSIASPRISEVERIQTLYSSVVDEASHSGPHIAESKGRRMEISLVPEKSQSLSFNKTSQSHQTTQITSSSQAINSAWEIAVATNQLHSGTSSSRSDAACLSSRVGSQSQRVVPVQPEKQTPASSPSLSNTAESKLELSVNASSPKKLGNKVAVSNSGRKGRLQTSSSSSTSVNGSRVNKQPHHTSRTIKMVIKNKSPSKKKVKEDSGSASCDPTSNEVSKSVPGTAQLVCERCRCALEDTKEEKNQEVMALDSTSPGNGVNFSNVHSSSYKPYSASNSGNIGKAVAKVEKIQKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSCGSRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSNIDPAKVSGLGAQSSCIEPLCIQPSCQVSCFSPRFLPAAAKARKLKVDPLAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLGFPDDPFVSFEAKDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCTIPPELPEFCDFGVLDMASHGKGAKYLECNVGQHVEFELF* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3212 876 MobiDBLite consensus disorder prediction 432 469 - -
Mtr7g3212 876 Gene3D Phosphorylase Kinase; domain 1 493 577 - -
Mtr7g3212 876 SUPERFAMILY Protein kinase-like (PK-like) 469 844 IPR011009 -
Mtr7g3212 876 SMART serkin_6 494 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3212 876 PANTHER FLIPPASE KINASE 1-RELATED 1 876 - -
Mtr7g3212 876 MobiDBLite consensus disorder prediction 221 353 - -
Mtr7g3212 876 Gene3D Transferase(Phosphotransferase) domain 1 719 840 - -
Mtr7g3212 876 Gene3D Transferase(Phosphotransferase) domain 1 578 643 - -
Mtr7g3212 876 CDD STKc_phototropin_like 492 844 - -
Mtr7g3212 876 ProSiteProfiles Protein kinase domain profile. 494 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3212 876 MobiDBLite consensus disorder prediction 315 329 - -
Mtr7g3212 876 MobiDBLite consensus disorder prediction 432 467 - -
Mtr7g3212 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Mtr7g3212 876 Pfam Protein kinase domain 723 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3212 876 Pfam Protein kinase domain 495 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g3212 876 MobiDBLite consensus disorder prediction 221 314 - -
Mtr7g3212 876 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3212 Mtr-Chr7 49217532 49222333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3212 1 876 AGC Kinase Gene Family AT3G52890 52.066 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr7g3212 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3212 - K08286 mtr:MTR_7g104180 1629.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3212 7 49217532 49222333 Mtr1g2060 1 30447797 30453036 ECH
Mtr7g3212 7 49217532 49222333 Mtr7g3212 7 49217532 49222333 ECH
Mtr7g3212 7 49217532 49222333 Mtr1g2060 1 30447797 30453036 PCT