Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3206 ATGGACTTTCCTACGAAACAATGGAGAAACCAACAGCATGAGTCAGAGAAACAACATTCCACAAAGATGCCAAAACTTCTTCACCCTGCTCAATCTCAATCCCAATCCCATTCCCATCAACAATCACCTGCACTTCCTTTGTTTCTACCTCAACCCAACACCAAAGTCACCAACTTGTCAGATTCAGCATTACCTTCCAACAACAGATTTCCCAGAATAGGAATGGGAAGCCATTTCAGCTTATCTCAATGGCAAGAACTTGAGTTACAAGCTTTGATATTTAGGTACATGTTGGTTGGTGCTTCTGTTCCTCCTGAACTTCTTCAACCTATCAAGAAAAGTCTTCTTCATTCATCTCCTTATTTTCTTCATCATTATCAACCTACAGCATTGTTGCAAAGTGGGTATTGGGGAAGAGGAGCAATGGATCCAGAGCCAGGTCGTTGCCGGAGAACAGACGGTAAAAAGTGGCGGTGTGCGAGGGATGTGGTGGCTGGACAAAAGTACTGTGAAAGACACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAACTAGTAATGGCGGTGGATCTTTCTCTGCTTTGTCTTCTATTTCTTCACAGCCTCTTGTCACTTCCTCATTCAAATCTCCTTTTGATCTTCACTTTACTGAACGCTCCACTGGGACCAAAATTGAAGAGAAGAGCTTATGTGAAAGCGATGATCATGTGGGTGGGGATGGAAGACCAGGTGGGCAAATGCTAAGGCATTTCTTTGACGATTGGCCACGATCACTGCAAGACTCTGACAATGCTGAAAACAATGGTGGGTCATCCTCCACATGTCTCTCAATTTCAATGCCAGGAAATAACAACACTTCTTCTTCTTCTTCAGATGTGTCATTGAAATTGTCCACTGGCTATGGAGAAGAACCATGTCCAAGAAATGAGAATGTGGGCCTAGTACAAACTGAGCAGCAACAACAACAACTTCAATTGAATTGGATCGGAGGATGGAATTCAGGTAATCAAGTGTCTTCAATGGGAGGACCACTTGCTGAGGCACTTAGATCATCTACTTCAACTTCTTCACCTACTAGTGTTTTACATCAATTGCCACGTTGTTCTGGTTCTCAAACCAGCTACATTAGCACCTAA 1155 0.4346 MDFPTKQWRNQQHESEKQHSTKMPKLLHPAQSQSQSHSHQQSPALPLFLPQPNTKVTNLSDSALPSNNRFPRIGMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSLLHSSPYFLHHYQPTALLQSGYWGRGAMDPEPGRCRRTDGKKWRCARDVVAGQKYCERHMHRGRNRSRKPVELPTPTSNGGGSFSALSSISSQPLVTSSFKSPFDLHFTERSTGTKIEEKSLCESDDHVGGDGRPGGQMLRHFFDDWPRSLQDSDNAENNGGSSSTCLSISMPGNNNTSSSSSDVSLKLSTGYGEEPCPRNENVGLVQTEQQQQQLQLNWIGGWNSGNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSQTSYIST* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3206 384 MobiDBLite consensus disorder prediction 1 52 - -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 173 197 - -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 231 312 - -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 346 384 - -
Mtr7g3206 384 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 7 23 - -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 267 303 - -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 25 52 - -
Mtr7g3206 384 MobiDBLite consensus disorder prediction 231 245 - -
Mtr7g3206 384 SMART QLQ_2 77 113 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr7g3206 384 PANTHER GROWTH-REGULATING FACTOR 3 9 384 - -
Mtr7g3206 384 ProSiteProfiles QLQ domain profile. 78 113 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr7g3206 384 Pfam QLQ 78 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr7g3206 384 Pfam WRC 144 186 IPR014977 -
Mtr7g3206 384 PANTHER - 9 384 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3206 Mtr-Chr7 49112756 49115487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3206 1 371 GRF Transcription Factor Family AT3G52910 48.411 2.45e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mtr7g3206 WRC 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3206 - - gmx:100814842 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3206 7 49112756 49115487 Mtr7g3206 7 49112756 49115487 ECH