Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3201 ATGCCTGAAAACAATACTACTTATGCATCATCATCATCAGGCAAAGTTTCAACTGGCCGTCACCCGGTGTACCGAGGAGTGAGGCGTAGGAATAACGGAAAATGGGTATCTGAAATTCGTGAACCGAAAAAACCTAACAGAATTTGGTTAGGGACATTTCCAACACCTGAAATGGCAGCTATTGCATATGATGTAGCTGCTCTTGCTCTTAAGGGTAAAAATGCTGAATTGAATTTCCCTAATTCTTCTTCTTCTTTTCCTGTTCCTGCTTCTTCTTCTGCCCGCGATATTCAAATGGCGGCAGCTAGTGCTGCAGCTGCTCTAGGTGCAGCCAATGATGCACTCATGAGTAACAATAATGAGGGAAATAACCACAATGTTTCAGTGGAACCACAAGAGTTTTTTTCAGGTGGCAATGAGAACAGTTATAATGTTAATGAGTTTGTTGATGAGGATTTGATATTTGATATGCCTAATGTTTTGGTTAATATGGCTGAAGGAATGCTACTTAGTCCTCCTCGTTTTGATTTTGTTAGTAATGACTATGACCATGCACCAGCTGAAAACATGTCATGTGATGATCAAAACCTTTGGAGTTATCCTTATTTTCCATAA 615 0.4 MPENNTTYASSSSGKVSTGRHPVYRGVRRRNNGKWVSEIREPKKPNRIWLGTFPTPEMAAIAYDVAALALKGKNAELNFPNSSSSFPVPASSSARDIQMAAASAAAALGAANDALMSNNNEGNNHNVSVEPQEFFSGGNENSYNVNEFVDEDLIFDMPNVLVNMAEGMLLSPPRFDFVSNDYDHAPAENMSCDDQNLWSYPYFP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3201 204 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Mtr7g3201 204 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
Mtr7g3201 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 201 - -
Mtr7g3201 204 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Mtr7g3201 204 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Mtr7g3201 204 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Mtr7g3201 204 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mtr7g3201 204 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Mtr7g3201 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 8 201 - -
Mtr7g3201 204 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Mtr7g3201 204 MobiDBLite consensus disorder prediction 1 18 - -
Mtr7g3201 204 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3201 Mtr-Chr7 49014657 49015634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3201 13 201 AP2-EREBP Transcription Factor Family AT2G36450 60.526 1.06e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr7g3201 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3201 - - gmx:100799620 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3201 7 49014657 49015634 Mtr7g3201 7 49014657 49015634 ECH
Mtr1g2066 1 30505438 30506131 Mtr7g3201 7 49014657 49015634 PCT