Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3200 ATGGAAATGGAAGACCATAATCAACACTATGATAGTAATAGTATCACTGATCTTAGACAACTCATTAATATTGTTCCAAGATCAACTACCAACAATTTCCCTACGGCGGAGCTATTCCCCGCCGGCAACCCACATCAACAACACTATGAGATGATGATGTTTGGTAGACAAGTAGCAGATATAATTCCTCGTTGTCTTCATGATTTTGTTTCAACAGATTCACCTGCTGTTGCTACTACTGCCACTCCTACCAACACTACCACTAGTGCTTCAACTCCTTCATTTAGTGGTAATTTAGAAGCTGAAACTACTGCTTTCATTGCTGTTGATGCTTCAACTGGAAGATGGCCTAGACAAGAGACTCTTACACTTCTTGAGATTAGATCTCGTCTTGATCCTCAATTCAAAGAAGCTACTCAAAAAGGTCCTCTTTGGGATCAACTTTCTAGGATAATGTGTGAAGAACATGGCTATCAAAGGAGTGGGAAAAAATGCAGGGAGAAGTTTGAGAATCTATACAAATACTACAAAAAGACCAAGGAAGGAAAAGCAGGAAGACAAGATGGGAAGCACTACAGATTCTTTCGACAACTTGAAGCCTTATATGGAGAAAACAATAACCCTTCTTCATCTTCACTCCCACAAAACAATTTTTGTACCAACAACAATGAAGAAATGTTTCATTCCCACATCAACAAACATTGTGATAGTCTCAGCCTCACAAACTCCACTGAATTCGACACATCATCGTCGGATGATGATGACAATGATCATAGTACTCATGAGGGGATCAAAGAGAATGAGTTCTCCATGGATAAGAGAAAAAAGAGGATTGGTGGAAGAAGCTTCTGGAAGGTAAAGATAAAAGACTTCATTGATTCACAGCTGAAGAAATTGGTGGCGAAGCAAGAGGAATGGATGGAGAAACTCACAAAGACATTGGAACAAAAGGAAAAAGAGAGGGTGCTAAGAGAAGAAGAGTGGAGGAAACAAGAGAAAGAAAGGTTGGAAAAAGAGCATAAATTTTGGGCTAAAGAAAGAGCATGGATTGAAGCTAGGGATGCTGCTTTAATGGAAGCTTTGCAAAAATTAACAGGTAATAATGATGAGATAATAAAGACTCAATCTTCTTCTCATGATGGAAATAAGAAGAGAAAGGAAAACTCAAGGAGTTGCTTTTACTTTGATGATAACAACAATGTTGATCGGTCTTGTTTATATAATGTTAACAATGGAGATGGAGCTGGTTCTTATTGTGATGTTAATGATCAAAGAGAAGAACTTGGGAGAGTACAAACAAATGATGGTTCAAATTCTAATAATGTTGTTGCGGCTGAAAATTGTTTCCCGTTCTTGATGAGTACTGAGGGAGGAAATTTGTGGGAGAATTACAACTTGAAGGTTAACAAAGCAAACCAAAACCAGTAA 1428 0.381 MEMEDHNQHYDSNSITDLRQLINIVPRSTTNNFPTAELFPAGNPHQQHYEMMMFGRQVADIIPRCLHDFVSTDSPAVATTATPTNTTTSASTPSFSGNLEAETTAFIAVDASTGRWPRQETLTLLEIRSRLDPQFKEATQKGPLWDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNNPSSSSLPQNNFCTNNNEEMFHSHINKHCDSLSLTNSTEFDTSSSDDDDNDHSTHEGIKENEFSMDKRKKRIGGRSFWKVKIKDFIDSQLKKLVAKQEEWMEKLTKTLEQKEKERVLREEEWRKQEKERLEKEHKFWAKERAWIEARDAALMEALQKLTGNNDEIIKTQSSSHDGNKKRKENSRSCFYFDDNNNVDRSCLYNVNNGDGAGSYCDVNDQREELGRVQTNDGSNSNNVVAAENCFPFLMSTEGGNLWENYNLKVNKANQNQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3200 475 Gene3D - 116 178 - -
Mtr7g3200 475 Coils Coil 300 327 - -
Mtr7g3200 475 ProSiteProfiles Myb-like domain profile. 108 173 IPR001005 -
Mtr7g3200 475 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 34 369 - -
Mtr7g3200 475 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 370 469 - -
Mtr7g3200 475 MobiDBLite consensus disorder prediction 253 270 - -
Mtr7g3200 475 PANTHER - 370 469 - -
Mtr7g3200 475 PANTHER - 34 369 - -
Mtr7g3200 475 MobiDBLite consensus disorder prediction 244 270 - -
Mtr7g3200 475 Pfam Myb/SANT-like DNA-binding domain 115 201 IPR044822 -
Mtr7g3200 475 CDD GT1 115 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3200 Mtr-Chr7 48983843 48986545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3200 382 470 Trihelix Transcription Factor Family AT5G03680 34.653 6.78e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr7g3200 Myb_DNA-bind_4 6.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3200 - - cam:101499561 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3200 7 48983843 48986545 Mtr7g3200 7 48983843 48986545 ECH
Mtr7g3200 7 48983843 48986545 Mtr1g2067 1 30554752 30558122 PCT