Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3193 ATGGAGTTTTGGGGTGTTGAGGTAAAACTTGGTGAATCACTCAAGGTTGTTCCAGAAAATAGCGAGCTTATCCACATTTCATCGGCATGTTTGGGGGAGGTCAGCAAGGATAAAGGGAGTGACCCGGTATCCCTGTATGTGAAGTTTGATGGTCAGAAGCTTCAACTTGGAACACTTTCTTCAGAAAAATTTCCTCAGACATCTTTTGATTTGGTTTTTGGGAAGAAATTTGAGCTATCCCATAACTGGAAATATGGGAGCGTCTTCTTTTCTGGATTTAGAATTGAATGCGAACCGGAACATGATTCTAGTGAAGATGAAGATTCTGATGATACTGATTCTGAAGAGGAAGATATTCCACTTAATGCTGATAATGGGAAACCTGTGTTGGAGGTGAATGGTGCCAAACCCGTTGTAAATGCATCAAAACAGAAAAAGAATCAGAAGGACGCTAGTACTGACGACAGTTCAGATTCATCTGATGAGGATTCTAGTGAAGATGAGCTCATGGCGAATGGTCAAATTAAAAGTAGTAGTGAAGATGAAAGCGATGAAGATTCTGATGAGGAGACACCGAAGAAGACTGAAGGGAGCAACAAGAGGGTTGCTGAATCTTCCAAGGAAACACCTGTACCTGTGAAGAAGGCAAAATTTGTCACTCCAGAGAAGACTGGTGGCAGGAGTAGTGTCCACGTTGATACTCCTTACCCTAAGCAGGCTGGTAAATCTGCTGCAAATAACAAGCAGCCAGAGAAGCAGGAGACTCCAAAGTCTAGTGGAGATTACAGCTGCAAGCCCTGTAACAGGTCTTTTAAGACTGAAGATGCCTTAGGTTCTCATAATAAGGCCAAGCACAGTGCCAAGTGA 867 0.4291 MEFWGVEVKLGESLKVVPENSELIHISSACLGEVSKDKGSDPVSLYVKFDGQKLQLGTLSSEKFPQTSFDLVFGKKFELSHNWKYGSVFFSGFRIECEPEHDSSEDEDSDDTDSEEEDIPLNADNGKPVLEVNGAKPVVNASKQKKNQKDASTDDSSDSSDEDSSEDELMANGQIKSSSEDESDEDSDEETPKKTEGSNKRVAESSKETPVPVKKAKFVTPEKTGGRSSVHVDTPYPKQAGKSAANNKQPEKQETPKSSGDYSCKPCNRSFKTEDALGSHNKAKHSAK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3193 288 MobiDBLite consensus disorder prediction 101 119 - -
Mtr7g3193 288 MobiDBLite consensus disorder prediction 99 288 - -
Mtr7g3193 288 Gene3D Nucleoplasmin core domain 1 99 - -
Mtr7g3193 288 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 284 - -
Mtr7g3193 288 Pfam C2H2-type zinc finger 262 286 - -
Mtr7g3193 288 MobiDBLite consensus disorder prediction 190 211 - -
Mtr7g3193 288 MobiDBLite consensus disorder prediction 240 266 - -
Mtr7g3193 288 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 284 - -
Mtr7g3193 288 Pfam Nucleoplasmin-like domain 3 92 IPR041232 -
Mtr7g3193 288 ProSitePatterns Zinc finger C2H2 type domain signature. 264 285 IPR013087 -
Mtr7g3193 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 262 288 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3193 Mtr-Chr7 48898433 48903140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3193 1 287 C2H2 Transcription Factor Family AT5G03740 44.186 8.09e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g3193 NPL 2.3e-09 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3193 - - gmx:100812152 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3193 7 48898433 48903140 Mtr7g3193 7 48898433 48903140 ECH