Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3178 ATGGAATCCAATGGACTAGGTGGTGGAATATTTCCAAACATCAATAATGGATTTCTAGGAGTAGAAAACCCTTCAAAACAACAACAAAACCATCAAAATCCTCACACTTTGCATCATCACCAAATGGTTTCCTATGATCAACCTCATCAATCAATCAAACAAGGCTACCCGTATCCATCCAAAACCAACAACAACAAACCACAACAAATCAACATCAACCTCAGTGATGAAGATGAACCATGTTTTGGAGCAGATGAAACCTCTGTTGGTGACCCAAAAAGAAAAGGATCACCATGGCATAGAATGAAATGGACAGATACAATGGTAAGACTCTTAATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTACTTCAGAATTAAGTGCTGATAAAAAGAAAGCTAATGGTTTATTACAAAAGAAAGGGAAATGGAAATCAGTTTCCAAAGGAATGATGGAAAAAGGGTACTATGTTTCACCTCAACAATGTGAAGACAAGTTCAATGATTTGAACAAAAGGTATAAAAGAGTTAATGATATTCTTGGTAAAGGAACAGCTTGTAGAGTTGTTGAAAATCAAACTTTGTTGGATACAATGGATTTGTCCGCAAAGTTGAAAGAAGAAGCTAGAAAACTTCTGAATTCTAAGCATCTTTTTTTTAGAGAAATGTGTGCTTATCATAATAGTTGTGGCCATGGAAACAACAATTTGCAACAACAATCCTCAACTGAGGCTCAACCACAACAGCATCATCATCCACAACAACAGCAACAACAGCAGCAGCAGCAGCAACAACAATGTTTGCATTCATCAAATGGGGTAGGGAGTTTAGGAATGTTGAAACTGAAAGGTAGAAATGGAGGAGGAGGAGAAGAGGAAGAGGATGAAGACGAAGACGATGAATGGGAGGATGATTCTGAAGAGGAAGAAGAAGAGTCAGGAGAAGGTGGTGGTTATGGTTCAAAGGGACATGAAGAAGATGAAAATATTGATCACTTAAGGAAAAAATCAAGAAAAGTTTCATCATTGCCATCACAAGTGATGCAACAGTTGAGTAGTGAAGTGATGAGTGTGTTGCAAGATGGAGTGAAGAGTTGTTGGGAGAAAAAGCAATGGATGAAGAAGAAGGTGGTGCAATTAGGAGAAGAACAGGTAAACTATCATGTGGAAGCATTTGAGATTGAAAAACAAAGGTTGAAATGGGTGAAATTTAGTAGTAACAAAGAAAGGGAAATGGAGAGACAAAAACTTGAAAATGAAAGGAAGAGTTTGGAAATTGATAGAATGGTTTTGTTGCTACGTCAAAAGGAGCTTGAATTGCAGAACACTCAGCAGCTGCAGCAGCAACAACATTCTTCTACTTGA 1368 0.3765 MESNGLGGGIFPNINNGFLGVENPSKQQQNHQNPHTLHHHQMVSYDQPHQSIKQGYPYPSKTNNNKPQQININLSDEDEPCFGADETSVGDPKRKGSPWHRMKWTDTMVRLLIMAVYYIGDEAGTSELSADKKKANGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSAKLKEEARKLLNSKHLFFREMCAYHNSCGHGNNNLQQQSSTEAQPQQHHHPQQQQQQQQQQQQQCLHSSNGVGSLGMLKLKGRNGGGGEEEEDEDEDDEWEDDSEEEEEESGEGGGYGSKGHEEDENIDHLRKKSRKVSSLPSQVMQQLSSEVMSVLQDGVKSCWEKKQWMKKKVVQLGEEQVNYHVEAFEIEKQRLKWVKFSSNKEREMERQKLENERKSLEIDRMVLLLRQKELELQNTQQLQQQQHSST* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3178 455 MobiDBLite consensus disorder prediction 292 315 - -
Mtr7g3178 455 Coils Coil 293 313 - -
Mtr7g3178 455 Pfam Myb/SANT-like DNA-binding domain 101 226 IPR044822 -
Mtr7g3178 455 Coils Coil 406 435 - -
Mtr7g3178 455 MobiDBLite consensus disorder prediction 236 328 - -
Mtr7g3178 455 MobiDBLite consensus disorder prediction 40 75 - -
Mtr7g3178 455 PANTHER F16F4.11 PROTEIN-RELATED 1 455 - -
Mtr7g3178 455 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 455 - -
Mtr7g3178 455 MobiDBLite consensus disorder prediction 236 274 - -
Mtr7g3178 455 MobiDBLite consensus disorder prediction 40 97 - -
Mtr7g3178 455 Gene3D - 104 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3178 Mtr-Chr7 48770696 48772590 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr7g3178 Myb_DNA-bind_4 2.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3178 - - gmx:100808934 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3178 7 48770696 48772590 Mtr7g3178 7 48770696 48772590 ECH
Mtr7g3178 7 48770696 48772590 Mtr1g2090 1 30861437 30863430 PCT