Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3152 ATGGATGCACGAAAAATTTCTATGGTGAATGGTTGCATTGTTTATACTCGAGCTAAGAGGTCTCTCAATTCGTCTACTACTTCTTCCGAGGAAATTCATGCCAAGAGATTCAAGGAAGATGCCGAGGTGAAGGAGGATGTGAAGAGCGAGTCTCGTGAGGTTCCGGTGAGGGCGACGCCGACGTTTAGGAGGATTACGAGATCGGCCACGAAATCGAAGGTTGAAACCGGTGAGGAAACGGTTACTGTGTTAGAACAGCGAGGTGAAGGTGATGCTGTTGCAGTTGGTAAAGGTGATGGTGAGGTGCCGGTGAAGAATTTCAAGCGAATTACTCGATCGGCGATGAAAGAAAAGGTTGAATCCGGAGAGGATAAGGTGACCGTGTTAGAACAACAAGGTGCTGCAGTTGCAACTGGTAATGGTGATGGTGCAATTCCGGTGAGGAGTTTTAAGCGAATTACGCGATCGGCGAAGAAAGAAAAAGTTGAATCCGGCGAGGAGACAGTCAATGTGTTAGAAGAACAAGGTGCTGCAGTTGCAAGTGGTGATGGTGTGGGGAGGACATTCAATCGGACTATGCGGTCTGCAACTATGAAAGCAAATGCTGGGTCCGGTGAGGAGACAGTGACGAAGTTAGACCAAGAAGGTGCTGCTGTTGAGAGTGAAATTGATGGTGCATTAGCTGTTCGGAGAAACAAGATGGAGTTGAAGACGTCGAAGAAGATTGCAGTTGATAAGAAGCGGCCTACAACAATGAAGGAGCTCTTTCGTACCGGTTTACTCGATGGTGTCTCTGTGGTTTATGTGAGCGGTATTAAGAAGGTCTCAGGATTAAGGGGTGTTATCAGAGATGAGGGAATATTGTGCTCGTGCTGTCTCTGTGAGGGACGCAGGGTTATTTCACCTTCCCAATTTGAGATTCATGCTTGCAAGCAATATAGGAGAGCAGTAGAGTATATTTGCTTTGAAAATGGGAAGAGCCTGCTTGATCTGTTGAGAGCGTGCAGGGGAGCTCCCCTGCATGATTTGGAGGCAACAATTCAAAATATTGTTTGTTCTCCACCTGAGGAAAAATATTTTACTTGTAAAAGGTGCAAAGGACGTTTCCCTTCTTCATGTATGGAAAGAGTGGGACCTATATGCAGTTCTTGTGTAGAATCAAGTAAATCTGAAGAAAGTTCGAAGAATGTAGTTAGCAAAAGAATCAGGTCTCCTAGACCAGTGTTGGTCTCCAAGTCATCCTGTGCTTCTGAGATGTCTATCTCTCCAAAAATTAAGAGACGCGGGAGGAAAAGAAGAAAGTCGTCAAAAAGGGTTAACAGCTCAAATTCTTCCAAGAGTGCTTCTGTGCCTATTCTACCCCGGAGGAAAGTTACGCCAAAGACGAAAAAGAAGTCACTGTCCGTAAAGTTGAAGACCACTTCAAATTCGAATTGTTTATCTCCACAAATTAAGAGTGAATGGAAGATAACTAAGAAGGATAATCGGTTGCACAAGTTAGTTTTTGAGGAAAATGGATTGCCTGATGGAAGTGAATTAGCTTATTATGCTGGCGGACAGAAATTGCTTGAAGGTTTCAAAAAAGGCTCTGGAATTGTTTGTAGATGCTGCAACACTGAGATTAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCCTCTCGCAAGAAACCTTATGCATACATTTACACATCAAATGGGGTGTCTCTTCATGAATTATCAATATCTCTCTCCAAAGACCGAAAATACTCTGCAAATGACAATGATGATCTATGTGTTGTTTGTTGGGATGGTGGAAATCTGTTGCTTTGTGACGGATGCCCAAGAGCATTTCATAAAGAGTGTGCATCTCTATCAAGTATTCCACGTGGTGACTGGTACTGTCAATTTTGCCAAAACATGTTCCAGAGGGAAAAGTTTGTCGCATACAATGTCAATGCTTTTGCTGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAAATCACCAAGAGATGCATTCGCATAGTCAAAGACATTGATGCTGAGCTTAGTGCATGTGCTTTATGCAGGGGTGTTGACTTCAGCAAATCTGGCTTTGGTCCACGCACAATAATACTCTGTGATCAGTGTGAAAAGGAGTATCATGTTGGCTGTTTGAGGGATCACAAGATGACATTTCTAAAGGAATTGCCAAAAGGTAACTGGCTTTGTTGCAATGATTGCACGAGAATACATTCTACTTTGGAGAATGTTTTAGTTAGAGGGGCTGAGAGACTCCCTAAATCTCTCTTGGCTGTTATAAAGAAAAAGCAAGAGGAAAAAGGATTGGATCCCATCAACGATATTAATGTGAGATGGAGGCTTCTTAGTGGGAAAAAAGCGTCTCCTGAAACCAGACCATTGCTTTTGGAGGCTGTCTCTATCTTTCATGAATGCTTCGATCCTATAGTTGATGCAGTTAGCGGGCGTGACCTTATTCGAGCAATGGTTTATGGAAAGAGTGTGCGGGGTCAAGAGTTTGGAGGAATGTATTGTGCATTACTAATAGTCAATTCATCCGTGGTATCTGCGGGCATGCTTCGAATCTTCGGTACAGATATTGCTGAACTTCCTTTAGTGGCAACAAGTAACAGTCAACATGGGAAGGGCTACTTCCAAGCACTATTCTCTTGCATCGAGAGGCTCTTGGCTTTCATGAAAGTAAAGAACCTTGTGCTACCAGCTGCAGAAGAAGCACAATCCATATGGACAGATAAATTTGGGTTTAGCAAGATTAAACCAGACGAGCTTGCCAACTACAGAAGGAACTGCAATCAGTTTGTGACCTTCCAAGGGACAAATATGCTTCATAAAATGGTACCTCCATGTCGAGTCATCAATAATCATCCCTGA 2874 0.436 MDARKISMVNGCIVYTRAKRSLNSSTTSSEEIHAKRFKEDAEVKEDVKSESREVPVRATPTFRRITRSATKSKVETGEETVTVLEQRGEGDAVAVGKGDGEVPVKNFKRITRSAMKEKVESGEDKVTVLEQQGAAVATGNGDGAIPVRSFKRITRSAKKEKVESGEETVNVLEEQGAAVASGDGVGRTFNRTMRSATMKANAGSGEETVTKLDQEGAAVESEIDGALAVRRNKMELKTSKKIAVDKKRPTTMKELFRTGLLDGVSVVYVSGIKKVSGLRGVIRDEGILCSCCLCEGRRVISPSQFEIHACKQYRRAVEYICFENGKSLLDLLRACRGAPLHDLEATIQNIVCSPPEEKYFTCKRCKGRFPSSCMERVGPICSSCVESSKSEESSKNVVSKRIRSPRPVLVSKSSCASEMSISPKIKRRGRKRRKSSKRVNSSNSSKSASVPILPRRKVTPKTKKKSLSVKLKTTSNSNCLSPQIKSEWKITKKDNRLHKLVFEENGLPDGSELAYYAGGQKLLEGFKKGSGIVCRCCNTEISPSQFEVHAGWASRKKPYAYIYTSNGVSLHELSISLSKDRKYSANDNDDLCVVCWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCQFCQNMFQREKFVAYNVNAFAAGRVEGVDPIEQITKRCIRIVKDIDAELSACALCRGVDFSKSGFGPRTIILCDQCEKEYHVGCLRDHKMTFLKELPKGNWLCCNDCTRIHSTLENVLVRGAERLPKSLLAVIKKKQEEKGLDPINDINVRWRLLSGKKASPETRPLLLEAVSIFHECFDPIVDAVSGRDLIRAMVYGKSVRGQEFGGMYCALLIVNSSVVSAGMLRIFGTDIAELPLVATSNSQHGKGYFQALFSCIERLLAFMKVKNLVLPAAEEAQSIWTDKFGFSKIKPDELANYRRNCNQFVTFQGTNMLHKMVPPCRVINNHP* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3152 957 SMART PHD_3 591 632 IPR001965 -
Mtr7g3152 957 SMART PHD_3 679 736 IPR001965 -
Mtr7g3152 957 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 835 921 IPR016181 -
Mtr7g3152 957 MobiDBLite consensus disorder prediction 395 468 - -
Mtr7g3152 957 Pfam PHD-finger 592 633 IPR019787 -
Mtr7g3152 957 Coils Coil 155 175 - -
Mtr7g3152 957 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 577 665 IPR013083 -
Mtr7g3152 957 ProSiteProfiles Zinc finger PHD-type profile. 589 634 IPR019787 -
Mtr7g3152 957 SUPERFAMILY FYVE/PHD zinc finger 578 637 IPR011011 -
Mtr7g3152 957 Pfam Tify domain binding domain 280 335 IPR032308 -
Mtr7g3152 957 Pfam Tify domain binding domain 525 573 IPR032308 -
Mtr7g3152 957 Coils Coil 112 132 - -
Mtr7g3152 957 MobiDBLite consensus disorder prediction 425 439 - -
Mtr7g3152 957 CDD PHD1_AIRE 591 631 - -
Mtr7g3152 957 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 675 738 IPR013083 -
Mtr7g3152 957 ProSitePatterns Zinc finger PHD-type signature. 592 631 IPR019786 -
Mtr7g3152 957 PANTHER AUTOIMMUNE REGULATOR 6 953 - -
Mtr7g3152 957 SUPERFAMILY FYVE/PHD zinc finger 670 733 IPR011011 -
Mtr7g3152 957 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 6 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3152 Mtr-Chr7 48522289 48534560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3152 209 954 PHD Transcription Factor Family AT2G36720 51.571 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr7g3152 TDBD 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3152 - - cam:101512705 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3152 7 48522289 48534560 Mtr1g2112 1 31127659 31138313 PCT