Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3151 ATGAAATTCAACAGAACCCTCTTTTGGCTTTCTGGTTTTGCCATCCTTCTCTTTTCTATCATCATTGTTCATTACACCACACCACCTTCAAACACCTCTAACACTGCCACCAGTAGTTCTCTAGATAGTTTATTAAGCAAGATAATAAAGCTACGTGGTGCTCAAGATTTTGTGTCTTTGTTGATAACAAGTATTGCGAGTACGAGACATCATCATTGGATGAGGCATAAGGAAAAATGTGACGAGGCCAAACGGGCTTCACAACTAATTTTAGACTATAATGCGACCATCACTTTCACAGTCGACTTAAATGGTCGTGCTAACTTTAGCAGCGTGCAGAAAGCGATTGATGCCGTTCCTGAATCTAGTTTTAATACAACCCTTATTATAATCAATTCTGGTACATACAGAGAAAAGGTAGTGGTCCAAGCCAACAAAACAAACATAATACTACAAGGTCAAGGCTATCTTGATACAATCATAGAATGGAATGACACTGCAAATTCCACTGGAGGGACTTCCTATAGCTACTCGTTTGCGGTTTTTGCTTCAAAGTTCACTGCTTACAACATTAGCTTTAAGAACACTTCTCCTCCACCTTCACCAGGAGAGGTTGGAGCACAAGCAGTGGCACTGAGAGTTACCGGTGATCAAGCCGCATTCTATGGATGTGGTTTCTATGGTGCGCAGGACACACTCAATGATGATAGTGGAAGACATTATTTTAAAGAATGTTTCATTCAAGGATCCATTGATTTTATATTTGGAAATGCTAGATCATTTTATGAGGATTGTACCATAAACTGTATAGCAAAACAAGATTTGGATGGGATTGGTGGATCTATCACAGCTCATGGACGACAATCATTGAAGGAAGAAACAGGATTTTCCTTTGTGAATTGCAACATCGTTGGAAGTGGAAAAGTGTGGCTTGGAAGAGCTTGGGGAGCATTTGCCACAGTGGTTTTTTCAACGACAAACATGTCTGATGTCGTAGCTGCTGAGGGATGGAACGATTGGAGAGATCCATCTAGAGACCGGAGTGTCTTCTTTGGGGAGTACCATTGTATAGGACTTGGAGCAAATTATACATCTAGAGTCTCTTATGCAAGACAACTCAGGGATTTTGAAGCAACCTCCTATATAAATGTTTCATACATTGATGGAAATGATTGGCTTCTTAACTATTTAACTTAA 1197 0.3993 MKFNRTLFWLSGFAILLFSIIIVHYTTPPSNTSNTATSSSLDSLLSKIIKLRGAQDFVSLLITSIASTRHHHWMRHKEKCDEAKRASQLILDYNATITFTVDLNGRANFSSVQKAIDAVPESSFNTTLIIINSGTYREKVVVQANKTNIILQGQGYLDTIIEWNDTANSTGGTSYSYSFAVFASKFTAYNISFKNTSPPPSPGEVGAQAVALRVTGDQAAFYGCGFYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNARSFYEDCTINCIAKQDLDGIGGSITAHGRQSLKEETGFSFVNCNIVGSGKVWLGRAWGAFATVVFSTTNMSDVVAAEGWNDWRDPSRDRSVFFGEYHCIGLGANYTSRVSYARQLRDFEATSYINVSYIDGNDWLLNYLT* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3151 398 Pfam Pectinesterase 100 390 IPR000070 GO:0030599|GO:0042545
Mtr7g3151 398 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 395 - -
Mtr7g3151 398 Gene3D - 93 397 IPR012334 -
Mtr7g3151 398 SUPERFAMILY Pectin lyase-like 96 393 IPR011050 -
Mtr7g3151 398 PANTHER PECTINESTERASE 14-RELATED 10 395 - -
Mtr7g3151 398 ProSitePatterns Pectinesterase signature 2. 247 256 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3151 Mtr-Chr7 48518755 48521264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3151 75 393 Carbohydrate Esterase AT1G05310 53.727 4.88e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3151 - - gmx:100802034 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3151 7 48518755 48521264 Mtr1g3123 1 42513024 42515073 PCT