Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3116 ATGTCAAAAGAGTCTGAAGAAATAAAAACTACTGAGCAATGGAAATGGTCTGAAATGCAAGGACTTGAGCTTGTGAGTGATGATAACAATTCTTCTTCTTCTGACCCTTTCAAAGGGAACTTGCCAACAGTAACAGAAGAAGGTGTTACTGCTACTGTTTCTGATTCTCAGAATCAAGTTCAAGTTTCAAAGGAAATGGAAGAACATAAGAAAGATGGTGGAAGTAAGGAGAAGGTTAAGAGTGCTCCTGCTGTTGGGTTTGGAGAACTTTTTAGATTTGCTGATGGGTTGGATTATATTTTAATGACAATTGGAACCGTTGGAGCAATTGTTCATGGTTGTTCCTTGCCTCTTTTTCTTAGATTCTTTGCTGATCTTGTTAACTCTTTTGGTTCCAATGCTAATAATTTGGATAAGATGACACAAGAAGTTGTCAAGTATGCATTTTACTTCCTTGTGGTGGGTGCTGCTATTTGGGCTTCTTCTTGGGCAGAGATTTCTTGTTGGATGTGGACTGGAGAGCGACAATCAACCAAGATGAGGATCAAGTATCTGGAAGCTGCATTGAAACAAGATATTGAATTCTTTGACACCGAGGTTCGAACTTCGGATGTTGTTTTTGCAATCAACACTGATGCTGTTATGGTTCAGGATGCCATTAGTGAGAAGCTTGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGATTCACTGCTGTTTGGCAATTGGCTTTGGTTACCCTTGCTGTTGTTCCTATGATAGCTGTAATTGGAGGCATTCACACAACTACTTTGGCTAAACTCTCCAGTAAGAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTAGAACAGACGGTTGTGCAAATCCGAGTAGTGTTAGCATTCGTTGGGGAGTCACGAGCACTTCAAGGCTACTCATCAGCCTTGAAGGTTGCTCAGAAACTTGGCTACAAAACTGGATTAGCAAAGGGAATGGGATTAGGTGCGACTTACTTTGTTGTTTTCTGCTGTTACGCGCTTCTTCTGTGGTATGGAGGCTATCTTGTAAGGCATCACGAAACCAATGGAGGGCTTGCCATTGCAACTATGTTTGCCGTCATGATTGGTGGAATAGGTTTGGGGCAATCTGCACCGAGCATGGCTGCATTTACAAAGGCTAGAGTTGCGGCTGCTAAGATTTTCCGGATAATTGATCACCAGCCTGGTATAGATAGAAACAGTGAATCTGGATTGGAATTAGAGACAGTTACTGGACTTGTTGAACTGAAAAATGTGGACTTCTCTTATCCATCAAGACCTGAAGTTCTGATCCTCAATGATTTCTCCTTGAGTGTTCCTGCCGGAAAGACCATAGCTTTAGTTGGTAGCAGCGGCTCTGGCAAGAGCACTGTTGTTTCTCTTATTGAGAGATTCTATGATCCAACTTCAGGACAAGTAATGTTGGATGGGCATGACATTAAAACTTTGAAGCTTAAATGGTTGAGGCAACAAATAGGACTAGTGAGCCAAGAACCTGCTTTGTTTGCCACCACGATTCGAGAAAATATACTCTTGGGAAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGCTTTGAAACTCAGGTAGGAGAAAGAGGACTACAACTTTCTGGAGGACAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTAAAAAATCCAGCAATTCTTCTCCTCGATGAGGCAACAAGTGCATTGGACTCTGAATCAGAAAAGCTGGTGCAAGAAGCACTTGACCGGTTCATGATTGGCAGGACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGCAAAGCTGACCTTGTAGCCGTGATTCAGCAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAGCTCTTTTCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATTAAGATGCAGGAGGTTGCCCATGAAACTGCTATGAATAATGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCCCCGATAATTGCTAGGAATTCTTCTTATGGTCGGTCACCGTATTCGCGTAGATTGTCTGATTTCTCTACATCAGATTTTAGTTTGTCACTTGATGCATCTCATCCAAATTACAAGCATGAAAAGCTTGCCTTCAAAGATCAAGCCGGTTCCTTCTGGAGACTAGTTAAAATGAACTCTCCTGAATGGCTCTATGCTTTACTTGGCTCAATCGGTTCAATTGTTTGTGGATCGCTTAGTGCTTTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTACTACAATCCAGACCACAAACACATGATCCGAGAAATAGATAAGTACTGCTACTTGTTGATTGGTCTTTCATCAACTGCACTTATCTTCAATACGTTGCAACATTTTTTCTGGGATATTGTCGGGGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGACGGCAGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGAATTTCTGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGACCGAATTTCGGTAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGCTTTGTGTTGCAGTGGCGTCTTGCCCTTGTCCTCATTGCTGTATTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCTGGGGAGGCAATAGCTAATGTAAGAACTGTTGCAGCCTTCAATTCAGAATCAAAAATTGTTCGCCTTTTCGCATCCAACCTTGAAACTCCGCTACAAAGGTGCTTTTGGAAGGGACAGATTTCCGGAAGCGGGTATGGAATAGCTCAGTTTGCACTTTATGCTTCTTATGCACTCGGTCTTTGGTATGCTTCTTGGCTAGTGAAACATGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGCGCTGCTGAGACTTTAACATTGGCTCCTGATTTCATCAAGGGAGGTAGAGCCATGAGATCAGTCTTCGATCTCCTTGACCGTCAAACCGAGATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGTGGTGAAGTTGAACTTAAGCATGTGGATTTCTCGTATCCCACTAGACCGGATATGCCGGTTTTTCGTGACCTTAATCTTCGAATCCGAGCTGGCAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGCTCGGTGATTGCACTTATACAGAGATTCTATGATCCAACGTCCGGCCGGATAATGATTGATGGAAAAGACATCAGAAAATATAACCTCAAGTCCTTAAGAAGACACATTTCTGTAGTACCTCAAGAGCCATGCCTATTTGCCACTACTATTTATGAAAACATTGCATATGGTCATGACTCAGCAACAGAAGCCGAAATAATCGAAGCAGCAACACTTGCTAATGCTCACAAGTTCATATCTTCTCTACCGGACGGATACAAAACATTTGTAGGGGAAAGAGGCGTTCAACTCTCAGGGGGACAAAAACAAAGAATAGCAGTTGCTCGCGCTTTTTTGAGGAAAGCCGAGCTTATGCTTCTTGACGAGGCAACAAGTGCACTTGATGCTGAATCAGAGAGATCAGTTCAAGAGGCGCTAGACCGCGCTTCAACGGGAAAAACAACCATAATTGTTGCACATAGGCTATCAACTATCAGGAATGCCAATGTGATTGCTGTGATTGATGATGGTAAAGTAGCTGAGCAAGGTTCACATTCACAGTTGATGAAAAATCATCAGGATGGGATATATGCGCGCATGATTCAATTACAAAGGTTTACACACAACGAAGTAATTGGTATGGCATCTGGTTCAAGTTCTTCAACATAA 4017 0.4269 MSKESEEIKTTEQWKWSEMQGLELVSDDNNSSSSDPFKGNLPTVTEEGVTATVSDSQNQVQVSKEMEEHKKDGGSKEKVKSAPAVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHETNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHQPGIDRNSESGLELETVTGLVELKNVDFSYPSRPEVLILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGFETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALLGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRQTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRIRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRIMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTHNEVIGMASGSSSST* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3116 1338 SUPERFAMILY ABC transporter transmembrane region 90 410 IPR036640 GO:0005524|GO:0016021
Mtr7g3116 1338 CDD ABC_6TM_Pgp_ABCB1_D1_like 102 399 - -
Mtr7g3116 1338 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 426 662 IPR003439 GO:0005524
Mtr7g3116 1338 Gene3D - 424 689 IPR027417 -
Mtr7g3116 1338 MobiDBLite consensus disorder prediction 62 78 - -
Mtr7g3116 1338 CDD ABC_6TM_Pgp_ABCB1_D2_like 748 1063 - -
Mtr7g3116 1338 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1081 1317 IPR003439 GO:0005524
Mtr7g3116 1338 CDD ABC_MTABC3_MDL1_MDL2 1081 1320 - -
Mtr7g3116 1338 ProSitePatterns ABC transporters family signature. 1220 1234 IPR017871 GO:0005524
Mtr7g3116 1338 ProSitePatterns ABC transporters family signature. 565 579 IPR017871 GO:0005524
Mtr7g3116 1338 SMART AAA_5 453 639 IPR003593 -
Mtr7g3116 1338 SMART AAA_5 1108 1300 IPR003593 -
Mtr7g3116 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1072 1320 IPR027417 -
Mtr7g3116 1338 CDD ABC_MTABC3_MDL1_MDL2 426 665 - -
Mtr7g3116 1338 Gene3D ABC transporter type 1, transmembrane domain 149 1054 IPR036640 GO:0005524|GO:0016021
Mtr7g3116 1338 SUPERFAMILY ABC transporter transmembrane region 745 1065 IPR036640 GO:0005524|GO:0016021
Mtr7g3116 1338 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 391 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g3116 1338 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 102 1323 IPR039421 -
Mtr7g3116 1338 MobiDBLite consensus disorder prediction 23 61 - -
Mtr7g3116 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 665 IPR027417 -
Mtr7g3116 1338 MobiDBLite consensus disorder prediction 1 78 - -
Mtr7g3116 1338 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 102 1323 - -
Mtr7g3116 1338 Gene3D - 1072 1327 IPR027417 -
Mtr7g3116 1338 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 758 1045 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g3116 1338 Pfam ABC transporter transmembrane region 102 375 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g3116 1338 Pfam ABC transporter transmembrane region 760 1028 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g3116 1338 Pfam ABC transporter 1100 1248 IPR003439 GO:0005524
Mtr7g3116 1338 Pfam ABC transporter 444 593 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3116 Mtr-Chr7 48119629 48126125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3116 104 682 Calmodulin-binding Proteins AT2G36910 39.071 1.09e-118 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3116 K05658 - gmx:100814667 2316.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3116 7 48119629 48126125 Mtr7g3116 7 48119629 48126125 ECH