Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3104 ATGCAAGTAGTCTGGTCTGGTATTATGAAGTGTTTTCCATTCCACTCTAGTGATAAGAAAGATGAACCTAAAGGCTTGCAATCCGCATCTGGTCGTTCTGACAGTTCCACATATGTTGACGTTGAAGGTAGAAGATGTGGTTCTGAATTGAATTCTCAGGATATCTCGGATAGTGGCAGCGTTGAATCCCTGAGGAGGAATGCACCTCCTAATTTGTCCCAAAGACCTAGTAATCTTAGAGTGTTTACTGTCTCTGAATTGAAATCGGCCACGAAGAATTTCAGCCGATCGGTTATGCTTGGAGAGGGTGGTTTCGGGTGTGTTTATCAGGGAGTAATTAGAAGTGTAGATGATCCATCTAGAAGAATTGAGGTTGCGGTTAAACAACTTAGTAAAAGAGGAGTGCAGGGGCATAGGGAATGGGTGACAGAAGTGAATGTTCTGGGAATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGATACTGTGCCGATGATGATGAACGAGGAATCCAACGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACATCATTTATCTCACCGAGCAGAGACTCCTCTCCCATGGAATAGGAGATTAAAAATAGCACACGACGCAGCTCGTGGATTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCGAGACTGGGACCATCGGATGGACTAACTCATGTTTCAACAGCGGTTGTTGGAACAATGGGGTATGCAGCTCCTGAATATCTCCAAACCGGACGCCTTACATCAAAGAATGATGTATGGAGCTACGGTGTTTTCCTTTATGAACTCATTACTGGCAGGCGCCCTTTAGATCGAAATCGCCCCAAGGGTGAACAAAAGTTATTGGAATGGATAAAGCCATACCTATCAGATACAAAGAAATTTCAACTGATATTGGATCCAAGACTTGATAAGAAACAAGTTATCAGATCAGCACAGAGACTTGCTACGATAGCTAACCGATGTTTAGTTAAAAACCCGAAGAATCGGCCAAAGATGAGCGAGGTTTTGGAAATGGTGAATGGAATAGTAGAATCATCATCCGACACTAATTCACAACTACCCTTGAAGAATGTTTCGAGAATAGAAGTTTCTCATGAAACTGAAATGAGGAACACAAAGAAGCGGACCATGGATCAGAAGCCTAGAGAAAGTAATTGGTTCGTTAGGTTGTGGAGACCAAAGCTTATAAGAACATGA 1305 0.4192 MQVVWSGIMKCFPFHSSDKKDEPKGLQSASGRSDSSTYVDVEGRRCGSELNSQDISDSGSVESLRRNAPPNLSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSRRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRAETPLPWNRRLKIAHDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPKGEQKLLEWIKPYLSDTKKFQLILDPRLDKKQVIRSAQRLATIANRCLVKNPKNRPKMSEVLEMVNGIVESSSDTNSQLPLKNVSRIEVSHETEMRNTKKRTMDQKPRESNWFVRLWRPKLIRT* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3104 434 CDD STKc_IRAK 100 378 - -
Mtr7g3104 434 ProSitePatterns Protein kinases ATP-binding region signature. 100 128 IPR017441 GO:0005524
Mtr7g3104 434 Gene3D Phosphorylase Kinase; domain 1 66 179 - -
Mtr7g3104 434 MobiDBLite consensus disorder prediction 17 76 - -
Mtr7g3104 434 Gene3D Transferase(Phosphotransferase) domain 1 180 401 - -
Mtr7g3104 434 Pfam Protein tyrosine and serine/threonine kinase 99 373 IPR001245 GO:0004672|GO:0006468
Mtr7g3104 434 SUPERFAMILY Protein kinase-like (PK-like) 71 375 IPR011009 -
Mtr7g3104 434 MobiDBLite consensus disorder prediction 49 76 - -
Mtr7g3104 434 PANTHER OS01G0588500 PROTEIN-RELATED 17 430 - -
Mtr7g3104 434 PANTHER KINASE 1B 17 430 - -
Mtr7g3104 434 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3104 Mtr-Chr7 47994465 47997951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3104 9 390 Glycoside Hydrolase AT3G07070 40.415 6.97e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr7g3104 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3104 - - gsj:114400704 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3104 7 47994465 47997951 Mtr7g3104 7 47994465 47997951 ECH