Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3100 ATGAAGTGCAAGTTTCTAAGAGGGTGTGTTAACAAGTTGAAGAAAATGACAAGACCTTGTGATTATTGGTTTGGATTGTTGTCTAGTGTGTTTGAAATGGATTCTATTCCAAATGATGTTCCAAAGGGTCACTTGGTTGTGTATGTAGGTGAGAACTATAAGAGATTTGTCATCAAGATTGGATTACTCCATCATCCACTTTTCAAGGCCTTGTTGGAACAAGCTCGAGAAGAATATGATTTCATTGCAGATTCTAAACTTTGTATTCCATGTAATGAACATCTTTTCCTTAGTGTTCTTAGTTTTGCTAGCTCCACACATAATGAAAAGGTGTTTGTTTGTGTCTGA 348 0.3592 MKCKFLRGCVNKLKKMTRPCDYWFGLLSSVFEMDSIPNDVPKGHLVVYVGENYKRFVIKIGLLHHPLFKALLEQAREEYDFIADSKLCIPCNEHLFLSVLSFASSTHNEKVFVCV* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3100 115 Pfam Auxin responsive protein 33 101 IPR003676 GO:0009733
Mtr7g3100 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 114 IPR003676 GO:0009733
Mtr7g3100 115 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3100 Mtr-Chr7 47955668 47956350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3100 38 104 Calmodulin-binding Proteins AT4G34750 44.776 1.12e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3100 K14488 - gmx:100812927 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3100 7 47955668 47956350 Mtr7g3100 7 47955668 47956350 ECH