Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3096 ATGGAAACAATATCAGCAGCTATCACAAAAAACAGTGCCAATGAATCATTCTGTTTGATTCATGCTAAGAATAATAACATGAAAGTGAATGAAGCTGATCCTTTGAATTGGGGTGTGGCAGCTGAGGCAATGAAAGGCAGTCACCTTGATGAGGTGAAGCGTATGGTGGAGGAGTACCGGAAGCCGGTGGTCCGTCTTGGTGGCGAAACACTGACCATTTCTCAGGTGGCTGCCATTGCTGCACATGACCATGGTGTGCAGGTGGAGCTGTCAGAATCTGCTAGGGCTGGTGTTGAGGCCAGCAGTGATTGGGTGATGGAGAGTATGAACAAAGGAACAGACAGTTACGGTGTCACCACCGGATTCGGCGCCACCTCACACCGCCGTACCAAACAAGGTGGTGCTTTGCAGAAAGAACTCATAAGGTTTTTGAATGCTGGAATATTTGGAAAAGGAAGTGAGTCAAGCCACACACTTCCACACACAGCAACAAGAGCTGCCATGCTAGTGAGAATCAACACACTCCTCCAAGGTTATTCAGGAATCAGATTTGAAATCTTGGAAGCCATCACCAATCTCCTTAACAACAACGTCACTCCATGTTTACCACTTCGCGGTACAATCACAGCTTCAGGAGATTTGGTCCCTCTATCTTACATTGCTGGTTTACTAACTGGAAGACCAAATTCCAAAGCTCATGGACCATCTGGAGAAATACTTAATGCAAAAGAAGCTTTTGCATTGGCTGGAATCAATGCTGAATTCTTCGAATTACAACCAAAAGAAGGCCTTGCACTTGTTAACGGAACAGCTGTTGGTTCCGGTTTAGCTTCAATTGTTCTCTTCGAGGCTAACATTTTGGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCTGAAGTTATGCAAGGGAAACCTGAGTTTACCGATCATTTGACACACAAGTTGAAACACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAACACATTTTGGATGGAAGTGCTTATGTCAAAGCAGATAAAAAGTTGCATGAGATGGATCCATTGCAGAAACCAAAACAAGATAGATATGCGCTTAGAACTTCACCACAATGGCTTGGTCCTTTGGTTGAAGTGATTAGATTCTCTACCAAGTCAATTGAGAGAGAGATCAACTCTGTCAACGACAACCCCTTGATTGATGTTTCAAGAAACAAAGCTTTGCATGGTGGAAACTTTCAAGGAACGCCTATTGGAGTATCCATGGATAATACACGTTTGGCTCTCGCATCAATTGGCAAACTTATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTTTTACAACAATGGATTGCCTTCAAATCTTTCTGCGAGTAGAAATCCTAGTTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGTTCTGAGTTGCAATATCTTGCAAATCCGGTTACAACCCACGTCCAAAGTGCCGAGCAGCACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCGAGAAAAACATATGAAGCCATTGAGATCCTTCAACTCATGTCTTCCACATTCTTGATTGCTCTTTGCCAAGCAATTGATTTAAGACATTTGGAGGAGAACTTGAAAAACTCAGTCAAGAACACCGTAAGTCAAGTCGCCAAAAAGACCCTTACCATAGGCGTGAATGGAGAACTTCATCCTTCAAGATTTTGTGAAAAAGACTTATTGAAAGTGGTTGATAGAGAGCATGTATTTGCTTATATTGATGATCCTTGTAGTGCTACATACCCATTGAGTCAAAAACTCAGGCAAGTGTTGGTAGATCATGCATTAGTTAATGGAGAGAGTGAGAAGAATTTGAACACTTCAATCTTTCAAAAGATTGCAACTTTTGAGGAAGAGTTGAAGAGCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGACCGCATATGAGAGTGGAAACCCAACAATTCCAAACAAGATCAATGGATGCAGATCTTATCCACTTTACAAGTTTGTTAGAGAGGAGTTGGGAACTGGTTTACTAACTGGAGAAAATGTCATTTCACCCGGTGAAGTGTGTGACAAATTATTCACAGCTATGTGTCAGGGAAAAATCATTGATCCTCTTCTTGAATGCTTGGGAGAGTGGAACGGTGCTCCTCTTCCAATTTGTTAA 2175 0.4221 METISAAITKNSANESFCLIHAKNNNMKVNEADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDHGVQVELSESARAGVEASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGKGSESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITNLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAKEAFALAGINAEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKADKKLHEMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEEELKSLLPKEVESARTAYESGNPTIPNKINGCRSYPLYKFVREELGTGLLTGENVISPGEVCDKLFTAMCQGKIIDPLLECLGEWNGAPLPIC* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3096 724 SUPERFAMILY L-aspartase-like 33 724 IPR008948 GO:0003824
Mtr7g3096 724 Gene3D - 23 270 IPR024083 -
Mtr7g3096 724 Gene3D - 537 658 IPR023144 -
Mtr7g3096 724 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 206 222 IPR022313 GO:0016841
Mtr7g3096 724 Gene3D Fumarase/aspartase (Central domain) 271 719 - -
Mtr7g3096 724 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 33 713 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mtr7g3096 724 CDD PAL-HAL 69 534 IPR001106 -
Mtr7g3096 724 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 24 724 - -
Mtr7g3096 724 PANTHER HISTIDINE AMMONIA-LYASE 24 724 IPR001106 -
Mtr7g3096 724 Pfam Aromatic amino acid lyase 71 546 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3096 Mtr-Chr7 47905368 47908399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3096 17 724 Monolignol Biosynthesis Gene Families AT2G37040 82.768 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3096 K10775 - gmx:100811101 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3096 7 47905368 47908399 Mtr1g3482 1 46259513 46266318 ECH
Mtr7g3096 7 47905368 47908399 Mtr1g2186 1 32105170 32109769 ECH
Mtr7g3096 7 47905368 47908399 Mtr7g3096 7 47905368 47908399 ECH