Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3084 ATGGGTAATATCTCAAGCACCGGCGCCCACAACCGTCGTCGACACGCCACCGCTTCCCGACGAACTCACCCACCACCACCACCTCCTGTAACACCACAACCCGAAATCGCACCTCATCAATTCGTCTACCCTGGTGCCGCACCGTACCCTAACCCACCCATGCATTATCCTCAATATCATTACCCTGGTTATTATCCACCACCCATACCTATGCCTCATCATCATCACCCCCATCCTCATCCTCATCCTCATATGGATCCTGCTTGGGTTTCTCGGTATTACCCTTGTGGACCTGTGGTCAATCAACCTGCACCTTTTGTTGAGCACCAGAAAGCTGTTACTATTAGAAATGATGTTAATATTAAGAAGGAGACCATTGTCATTTCGCCTGATGAGGAAAATCCTGGTTTTTTTCTTGTTTCGTTTACCTTTGATGCTGCTGTTTCTGGGAGCATCACCATATTTTTCTTTGCAAAAGAAGATGAAGGCTGCATCCTCACACCGACCAAGGAAACCCATCTTGCACCTGTGACTGTACAATTCCAGCAAGGTCTTGGACAGAAGTTTAGACAGCAAGCTGGAACTGGTATTAACTTTTCAATGTTTGAGGAGTCAGATTTAGTAAAGGTGGGTGACGTGGATGTTTACCCTCTAGCAGTGAAGGCAGATGCATCATCCGATAATCATGATGGATCAAATGAAACTGAGACATCTAGTAAACCAAACTCTCAGATAACTCAAGCGGTGTTTGAGAAGGAAAAAGGAGAATTCCGGGTAAAAGTTGTTAAGCAGATCTTGTCAGTGAATGGAATGCGGTATGAGCTGCAGGAGATATATGGTATTGGAAACTCAGTGGAGAGTGACGTGGATGACAATGAACAAGGAAAAGAGTGTGTGATCTGCTTGTCAGAACCTCGCGACACAATTGTTCACCCCTGCCGACATATGTGCATGTGTAGTGGATGTGCAAAGGTATTGAGATTCCAGACAAATAGATGCCCGATTTGCAGACAACCAGTTGAGAGGCTTTTGGAGATAAAAGTAGGGACTGAGGAGTGA 1059 0.4561 MGNISSTGAHNRRRHATASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVGDVDVYPLAVKADASSDNHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVVKQILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGTEE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3084 352 ProSiteProfiles Zinc finger RING-type profile. 298 337 IPR001841 -
Mtr7g3084 352 PANTHER MAHOGUNIN 1 351 IPR045194 GO:0061630
Mtr7g3084 352 SUPERFAMILY RING/U-box 297 342 - -
Mtr7g3084 352 SMART ring_2 298 336 IPR001841 -
Mtr7g3084 352 Pfam Zinc finger, C3HC4 type (RING finger) 296 342 - -
Mtr7g3084 352 MobiDBLite consensus disorder prediction 21 35 - -
Mtr7g3084 352 MobiDBLite consensus disorder prediction 224 244 - -
Mtr7g3084 352 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 297 337 IPR045195 -
Mtr7g3084 352 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 351 - -
Mtr7g3084 352 MobiDBLite consensus disorder prediction 1 43 - -
Mtr7g3084 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 347 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3084 Mtr-Chr7 47654146 47659446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3084 87 317 C3H Transcription Factor Family AT3G09770 60.593 9.73e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3084 - - aprc:113862864 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3084 7 47654146 47659446 Mtr7g3084 7 47654146 47659446 ECH