Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3073 ATGGCCGATAAAGTTCCCCCGAATGCTGGATCTCAAGGGTTCAACCCAGGCTTGATTGTTCTCCTGGTTATTGGTGGGTTGCTGTTGACATTTCTCATTGGAAATTACGCGCTCTACGTTTATGCACAGAAGGCCCTCCCTCCTAGAAAAAAGAAACCAGTCTCGAAAAAGAAGATGAAAAAGGAGAGGCTGAAGCAAGGAGTCTCTGCACCTGGAGAGTAA 222 0.4685 MADKVPPNAGSQGFNPGLIVLLVIGGLLLTFLIGNYALYVYAQKALPPRKKKPVSKKKMKKERLKQGVSAPGE* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3073 73 Pfam DNA binding protein S1FA 10 73 IPR006779 GO:0003677|GO:0005634|GO:0006355
Mtr7g3073 73 PANTHER DNA-BINDING PROTEIN S1FA2 7 73 IPR006779 GO:0003677|GO:0005634|GO:0006355
Mtr7g3073 73 MobiDBLite consensus disorder prediction 48 73 - -
Mtr7g3073 73 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 7 73 - -
Mtr7g3073 73 MobiDBLite consensus disorder prediction 49 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3073 Mtr-Chr7 47516023 47518022 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Mtr7g3073 S1FA 2.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3073 - - gmx:100500059 109.383