Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3071 ATGGCCGATGAATTTGAATTCGGTGATAAAATCCCTCCTTCCTTTGATCGCATGAAAGCTGGATCTCAAGGGTTCAACCCAGGCTTAGTAGTTCTCCTGGTTATTGGTGGGCTGCTGTTGACATTCCTCATTGGAAATTATGCGCTTTATGTTTATGCACAGAAGGCCCTCCCTCCTAGAAAAAAGAAGCCAATCTCAAAAAAGAAGATGAAAAAAGAGAGACTGAAGCAAGGAGTCTCTGCACCTGGAGAGTAG 255 0.4392 MADEFEFGDKIPPSFDRMKAGSQGFNPGLVVLLVIGGLLLTFLIGNYALYVYAQKALPPRKKKPISKKKMKKERLKQGVSAPGE* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3071 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Mtr7g3071 84 MobiDBLite consensus disorder prediction 61 84 - -
Mtr7g3071 84 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 84 - -
Mtr7g3071 84 PANTHER DNA-BINDING PROTEIN S1FA2 3 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3071 Mtr-Chr7 47497587 47498472 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Mtr7g3071 S1FA 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3071 - - gmx:100500059 129.798