Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3050 ATGATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTTCTTACAAATCTTTCTCAGAACTTCTAGCAGGTGCAATCGATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCAATGAATATCCCCCCTTCTCAGGTTAATATTTCTGGAGGTGCACTTAGCAGTTCTTCTGACATGGATCCCAAACCTGATACCAATCAATCTCTCATTTACAAACCAATGGCAAAATTTGTGTCACAAACAACCGTCTCTCTGTTGGCAAACATGGGAATTTGCAGTACTAATCAGCAACAACCACAGAAATCAAGGGAGACCAATCCTCAGCATCTTAACCATGACAACTTTAGAGCTAACATGAGCTCGAAATTACATCAGAACATTACCCTTCCTACAGAAACATATCAGGCCACAGAATCTTGTATGATGGCACCACAGAACATTGAGGAGGACCAAAAAGCATTACCATCCACAAATAATGCTGATAGACCTTCGTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTATTACAAGTGCACATATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGGAAAGCCACAACATCAAAAGCGAAACTCGGGAGCAACATCAGGAATGATTTCTGATGGAATGGTTCAAGATAAAGTATGGAGTAATAATAGTAATCAGAATGAAAGGAATGAAGGAAGAATAGAGAATCAAGTCAAAGCTTCACTGCCTGATGATTCTGCTCTAGAAACTTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGACTCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCAAATGAAGTGGCAGTATCAGAGGAAGGTTTAGTAGAGCCACACATTGTTATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAGTATCAACTGTAACGTTCGCAAGCATGTGGAGAGATCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAGCACAACCATGAGATGCCACTCAAGAACACAACAAATATGACATCTGAAAAAGATTCAACGACTTCTCTTAAGTAA 1317 0.3971 MMDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAIDSTPPIASSQTTISAIRPKTVRFKPAMNIPPSQVNISGGALSSSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMGICSTNQQQPQKSRETNPQHLNHDNFRANMSSKLHQNITLPTETYQATESCMMAPQNIEEDQKALPSTNNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSLDGEIAEIVYKGEHNHGKPQHQKRNSGATSGMISDGMVQDKVWSNNSNQNERNEGRIENQVKASLPDDSALETSCGLSGECEEGSKGFEAEEDDSRSKRRKNENQSNEVAVSEEGLVEPHIVMQSSVDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTSINCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKNTTNMTSEKDSTTSLK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3050 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 430 IPR044810 GO:0003700
Mtr7g3050 438 MobiDBLite consensus disorder prediction 413 438 - -
Mtr7g3050 438 ProSiteProfiles WRKY domain profile. 355 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 SMART WRKY_cls 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 SMART WRKY_cls 360 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 ProSiteProfiles WRKY domain profile. 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 MobiDBLite consensus disorder prediction 420 438 - -
Mtr7g3050 438 MobiDBLite consensus disorder prediction 62 87 - -
Mtr7g3050 438 MobiDBLite consensus disorder prediction 317 335 - -
Mtr7g3050 438 MobiDBLite consensus disorder prediction 238 340 - -
Mtr7g3050 438 MobiDBLite consensus disorder prediction 66 87 - -
Mtr7g3050 438 Pfam WRKY DNA -binding domain 362 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 Pfam WRKY DNA -binding domain 190 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 SUPERFAMILY WRKY DNA-binding domain 187 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 Gene3D WRKY domain 173 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 Gene3D WRKY domain 346 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 MobiDBLite consensus disorder prediction 250 282 - -
Mtr7g3050 438 SUPERFAMILY WRKY DNA-binding domain 354 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr7g3050 438 PANTHER OS12G0507300 PROTEIN 19 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3050 Mtr-Chr7 47310774 47315279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3050 84 421 WRKY Transcription Factor Family AT2G37260 44.262 6.55e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr7g3050 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3050 - - gmx:100794069 637.106