Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3010 ATGGCATTTTTCTTTGGATTTCACCGCTTGCTTCGTCACTCTCAATCCCCACTTGTTAGCTCCCATTTCACTTCCATTCGTCTCAATTCAACTCTCACTTCCCCCAAACTCTTCATTAGCGGTCTTTCAAGACTGACAACAGATGAAAAACTTACAGAAGCATTTTCTCCTTTTGGACAGCTGTTGGAAGCTAAGGTGATAACTGATAGAGGCTCTGGAAGATCGAAGGGTTTTGCTTTTGTATCTTATTCAACCATAGAAGAAGCTGAGAAGGCAAGAGAAGGCATGAATGCTAAATTTTTGGATGGTTGGGTTATATTTGTTGATCCTGCCAAACCAAGAGAACCCAGACCTCCTCAGCAGTCACAATCTCAGCCGTCTCAAACAGGCTTCACCGTAAATAAGACCGTTGGGTGGTGTGGTTGA 426 0.4343 MAFFFGFHRLLRHSQSPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSQTGFTVNKTVGWCG* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3010 141 MobiDBLite consensus disorder prediction 121 135 - -
Mtr7g3010 141 MobiDBLite consensus disorder prediction 111 141 - -
Mtr7g3010 141 Gene3D - 26 135 IPR012677 -
Mtr7g3010 141 PANTHER NUCLEOLAR PROTEIN 8 1 141 - -
Mtr7g3010 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 103 IPR000504 GO:0003723
Mtr7g3010 141 SMART rrm1_1 36 109 IPR000504 GO:0003723
Mtr7g3010 141 SUPERFAMILY RNA-binding domain, RBD 34 135 IPR035979 GO:0003676
Mtr7g3010 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Mtr7g3010 141 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3010 Mtr-Chr7 47009991 47012477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3010 37 128 Eukaryotic Initiation Factors Gene Family AT3G16380 37.895 1.26e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3010 - - gmx:100804327 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3010 7 47009991 47012477 Mtr7g3010 7 47009991 47012477 ECH