Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2990 ATGAACAACTACTGCGTTTCATATTTCCAATCTCAAATGGATCAACAACGATTGCCTCGTCCTAAGAAACCAATCATTGCAGATGATGAGATCATGGAGTTGTTATGGCAAAACGGCCAAGTTGTTACACAGAGGCCAAACCACCGTCATGCCAAGAAACCACCGTCATGTCAAGAAACAACTCGCGGCGGAGGAGCTTCTCCAGTAGAAAACTACAATCAATATCTCTTCATGCAAGAAAACGAAATGGCTTCATGGCTTCATTACGATGATTCTCCCTTCGATCGAACCTTCTCCACTGATTACCTCAATACGCCGCCGGCGACGGCTAATAACAACAGTAGCATACAAACTCCGACGTCGGTGGTTCCTTCTCGTCCTCCAATTCCCCCGCCACGGAGGATGGGGCACGTACAGCCTGAGACACCGAATTTCGCAAAACACGGTGTAATGAACACTGCTGTGAGGGAATCAACGGTTGTGGATTCGTGTGATACACCAGCTGTGATGCCGGCGGCGTTTTCGGAGACGGTGAAAAGCTTGGCGGATCAAACGGAAGGAGACACCGAAGTAGCGGTGGTTTCGACAACTTTTGATGAACCGGGAGGTTCAAGTAGCAGTGAAGAACCTGAACCGGTTGGGAAGGTAGCGGAGCAGGACCGAAAGAGGAAGGGAATAGAAGCGGAGGAATGGGAATATCAGAGCGAGGATGTTGATTTTGAATCTGCGGAAGCCAAAAAAAATATCAGTGGATCATCTACAAAGAGATCTCGTGCTGCTGAGGTCCATAATCTCTCAGAGCGGAGGCGCCGTGATCGGATTAATGAAAAGATGAAAGCTCTGCAAGAACTTATACCTCGATCTAATAAGTCTGACAAAGCATCTATGCTGGATGAAGCAATTGATTACTTGAAGTCGCTGCAGTTACAAGTGCAGAGAGTACAACTTATGCAGATGATGTCCATGGGATGTGGCATGGTACCTATGATGTTTCCTGGAATCCAGCAGTATATGCCAACGGTTGGAATGGGAATGGGGATGGGTATGGAAATGGGAATAAACAGACCAGTAATGCCATTTCCCAATATGTTATCCGGTTCTGCTTTGCCTGCAGCCGCAAATTTGGGACCAAGGTTCGCGATGCCTCCTTTCCATATGCCGCATGTTCCAACACCTGGTTCATCCAGAATGCAAGCAGCAAATCAGGTAGATAATAATGTGATCACCTCAGCTGGAACACATGATTCAAATCAGTCACGTACCCCAAACTTCAGTGATTCTTATCAACAATATCTTGGACCCCACCAGATGCAGTTTCAATTGATGCAGAATCAAGCAATGAACCAACCAAATGTCAGCAGGCCTCTTGAGAAACCAGAAACCCGCCAGTCAGGAGATAAGTGA 1404 0.4694 MNNYCVSYFQSQMDQQRLPRPKKPIIADDEIMELLWQNGQVVTQRPNHRHAKKPPSCQETTRGGGASPVENYNQYLFMQENEMASWLHYDDSPFDRTFSTDYLNTPPATANNNSSIQTPTSVVPSRPPIPPPRRMGHVQPETPNFAKHGVMNTAVRESTVVDSCDTPAVMPAAFSETVKSLADQTEGDTEVAVVSTTFDEPGGSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTVGMGMGMGMEMGINRPVMPFPNMLSGSALPAAANLGPRFAMPPFHMPHVPTPGSSRMQAANQVDNNVITSAGTHDSNQSRTPNFSDSYQQYLGPHQMQFQLMQNQAMNQPNVSRPLEKPETRQSGDK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2990 467 MobiDBLite consensus disorder prediction 442 458 - -
Mtr7g2990 467 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 3 458 IPR031066 -
Mtr7g2990 467 MobiDBLite consensus disorder prediction 43 68 - -
Mtr7g2990 467 MobiDBLite consensus disorder prediction 409 429 - -
Mtr7g2990 467 MobiDBLite consensus disorder prediction 213 231 - -
Mtr7g2990 467 SMART finulus 264 313 IPR011598 GO:0046983
Mtr7g2990 467 CDD bHLH_AtPIF_like 258 327 - -
Mtr7g2990 467 MobiDBLite consensus disorder prediction 105 122 - -
Mtr7g2990 467 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 3 458 - -
Mtr7g2990 467 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 307 IPR011598 GO:0046983
Mtr7g2990 467 Coils Coil 264 284 - -
Mtr7g2990 467 MobiDBLite consensus disorder prediction 197 266 - -
Mtr7g2990 467 Gene3D - 253 319 IPR036638 GO:0046983
Mtr7g2990 467 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 256 316 IPR036638 GO:0046983
Mtr7g2990 467 MobiDBLite consensus disorder prediction 105 136 - -
Mtr7g2990 467 MobiDBLite consensus disorder prediction 442 467 - -
Mtr7g2990 467 Pfam Helix-loop-helix DNA-binding domain 262 308 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2990 Mtr-Chr7 46775123 46779596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2990 21 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 43.544 8.44e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g2990 HLH 3.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2990 - - gmx:100797225 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2990 7 46775123 46779596 Mtr7g2990 7 46775123 46779596 ECH
Mtr7g2990 7 46775123 46779596 Mtr1g2315 1 33650944 33659499 PCT