Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2989 ATGGCCTCACCTCAAAACTTTGTATCCAAGCTAACAGCACTGGTTGTGGATGACAATATAATTAACCGAAAGATTCATCAAAAGATGTTGAATAAATTTGGAGTCAAAAGTCAAGGTGTGGAGAATGGAAAAGAAGCAGTGGACATTCATTGGCGTGGACAAAAATTTGACCTAATTCTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGTGCAATGGGTATTTGTAGCACAATTGTTGGTGTGTCATCACGCTCTATGGAAGATGAAATACTAAAATTCATGGAAGCTGGATTGGATGAATATCAAGAGAAACCCTTGAACAATGCAATACTTAGTTCCATTCTTGGCAAGATCACTCCAACTGTGTGA 393 0.3893 MASPQNFVSKLTALVVDDNIINRKIHQKMLNKFGVKSQGVENGKEAVDIHWRGQKFDLILMDMDMPIMNGIEATKELRAMGICSTIVGVSSRSMEDEILKFMEAGLDEYQEKPLNNAILSSILGKITPTV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2989 130 SMART REC_2 11 123 IPR001789 GO:0000160
Mtr7g2989 130 Gene3D - 1 127 - -
Mtr7g2989 130 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Mtr7g2989 130 SUPERFAMILY CheY-like 9 126 IPR011006 -
Mtr7g2989 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 128 - -
Mtr7g2989 130 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 128 - -
Mtr7g2989 130 CDD REC_hyHK_CKI1_RcsC-like 14 123 - -
Mtr7g2989 130 Pfam Response regulator receiver domain 14 119 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2989 Mtr-Chr7 46765705 46767721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2989 11 117 Response Regulator Gene Family AT3G04280 46.789 1.07e-26 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr7g2989 Response_reg 9.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2989 - - gmx:100794931 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2989 7 46765705 46767721 Mtr7g2989 7 46765705 46767721 ECH