Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2979 ATGCCGCCGTCGGTCCTCTTCCTCTTTGCTCTTCTTAACTTCTTCTTCTCTTCCCAAGTGGAGTCATTTTCTCTGAGTATGTCATTTGCTTCATTGGAACAAACTAAATCGTGGTTTGTTAAGCCTTCTTCTGCACCAACTTCTGCACCTGTGCCATCTCCATCCTATCAAGGTCCTAGTGTGACTCCAAGACACAAACATCATCATCATCATCGACGGCATCATAGCACGAGACCTCCTTATGCAGGGGCTCCACCCCCTTCCACAGACCCAGCTTGCGATCAAATATGTACGGATCCTCTCACATCAACTCCCTTTGGTTCACCCTGTGGTTGTGTATTTCCTATGAAAGTCAGACTTACACTGGATGTAGCTCCTTTTGCTGTTTTTCCAGTATTGAACGAGTTAGAGTATGAAGTTGCGCTAGGCACATATTTAGAACAGAGTCAGGTGAAGATAATGGGTGCAACTGCTGACAGTCAAAATCAGGGAAGAACTAGTGTCGATATTAATTTGGTTCCATTAGGAGAGAAGTTTGACAACACAACTGCAGCCCTGACATACGAGAGGTTTTGGCACAAAAAAGTTCCTCTAAATAGGAGCCTTTTTGGTGACTATGCTGTCATGTACATTACATATCCAGGACTTCCATCGTCACTGCCATCTGGAACACCAATTGGGAGCGGTCCCAGTCAAAATGATGATGGTATACTGCCATTTAGCGCCAATTTTGATAGCAAGAGCCAGAAAACGAATCTTAGAACCATAGTCATTATTGCTTTGTCTTCTTTTGTGCTCTTGCTGGTTTTGATTGGAGCATTTTTTGTTACTTTGAAATGGAGGAAGACTAGGAGACCATCAAGTGCTGTTGGTCCAGCATTTACATCTTCTCTGAACAAGAGATCTGGTTTGGGGTCTATGCTGTCAAGCAGTATTGCAAGCTCAACATCAATGTCCCTCATGTCCACAATGCCCACTTCCATTCTATCTGTTAAAACATTTTCACTTTCTGAGATTGAGAAAGCAACAGATAAGTTTAATACAAAGAGAGTATTAGGGGAAGGAGGATTTGGACGTGTTTATAGTGGGACATTGGAAGATGGAGCTGTAGTTGCGGTGAAGCTCCTTACTAGGGATAATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTAAGTCGTTTGCATCATCGCAATCTAGTGAAACTTATCGGTATATGCATTGAAGGGCGCAGGCGTTGTCTGGTATACGAGCTTGTTCCTAATGGCAGTGTTGAGTCCCATCTGCATGGTGATGACAAGAATAGGGGACCTCTAGATTGGGAAGCACGTATGAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCGTATCTTCACGAGGATTCCAATCCCCGTGTAATTCATCGAGACTTCAAAGCTAGCAATGTGTTATTAGAAGACGACTTTACCCCTAAAGTTTCTGATTTCGGTTTAGCAAGAGAAGCAACTGAAGGGAGTAATCATATTTCTACACGGGTGATGGGGACTTTTGGGTACGTTGCCCCAGAATATGCAATGACGGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTACGGTGTTGTGCTTCTTGAACTTCTCACAGGCAGAAAACCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTTACCTGGGCACGGGCACTGTTGACTAGTAGAGAAGGTTTAGAGCAGCTAGTGGATCCATCTTTGGCTGGAGGTTACAACTTTGATGACATGGCAAAGGTAGCAGCTATTGCGTCAATGTGTGTTCACTCCGAGGTGACACAGAGACCTTTTATGGGAGAAGTTGTGCAGGCTCTTAAATTAATATACAATGACACAGACGAGACTGGTGGAGATTATTGTAGTCAGAAGGACTCCTCTGCTCAGGAGTCTGATTTCAGAGGTGAGCTTGCCCCTTCTGATAGCAGTTGGTGGAATGGTGGAGGTTTAACTCCTCGATTAACTTATGGACAAGCATCTTCCTTTATCACAATGGAGTACAGTTCTGGTCCACTTGAAGATATGGAAAACAGACCGTTTTCAACTTCAAGCTTTAATGGAGATGAGCTATCTTTACCAATTAGGCATGGGAATAGGTCAGGTCCCTTAAGAACGACCCGAAGCAAGTTATCCTTATATAGATTTTCAGGAAGTCGGAGTGAGCATGGGGAAGTTTCGTCTAAGCGAAATTGGATTTGA 2238 0.4366 MPPSVLFLFALLNFFFSSQVESFSLSMSFASLEQTKSWFVKPSSAPTSAPVPSPSYQGPSVTPRHKHHHHHRRHHSTRPPYAGAPPPSTDPACDQICTDPLTSTPFGSPCGCVFPMKVRLTLDVAPFAVFPVLNELEYEVALGTYLEQSQVKIMGATADSQNQGRTSVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAVMYITYPGLPSSLPSGTPIGSGPSQNDDGILPFSANFDSKSQKTNLRTIVIIALSSFVLLLVLIGAFFVTLKWRKTRRPSSAVGPAFTSSLNKRSGLGSMLSSSIASSTSMSLMSTMPTSILSVKTFSLSEIEKATDKFNTKRVLGEGGFGRVYSGTLEDGAVVAVKLLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVPNGSVESHLHGDDKNRGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARALLTSREGLEQLVDPSLAGGYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETGGDYCSQKDSSAQESDFRGELAPSDSSWWNGGGLTPRLTYGQASSFITMEYSSGPLEDMENRPFSTSSFNGDELSLPIRHGNRSGPLRTTRSKLSLYRFSGSRSEHGEVSSKRNWI* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2979 745 MobiDBLite consensus disorder prediction 62 78 - -
Mtr7g2979 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Mtr7g2979 745 MobiDBLite consensus disorder prediction 46 90 - -
Mtr7g2979 745 Gene3D Transferase(Phosphotransferase) domain 1 423 644 - -
Mtr7g2979 745 Pfam Protein tyrosine and serine/threonine kinase 348 619 IPR001245 GO:0004672|GO:0006468
Mtr7g2979 745 CDD STKc_IRAK 352 622 - -
Mtr7g2979 745 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Mtr7g2979 745 PANTHER OS01G0750732 PROTEIN 5 744 - -
Mtr7g2979 745 Gene3D Phosphorylase Kinase; domain 1 318 422 - -
Mtr7g2979 745 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g2979 745 SUPERFAMILY Protein kinase-like (PK-like) 323 622 IPR011009 -
Mtr7g2979 745 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 5 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2979 Mtr-Chr7 46612141 46618968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2979 96 736 Receptor kinase-like Gene Family AT5G56890 54.505 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mtr7g2979 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2979 - - gmx:100792309 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2979 7 46612141 46618968 Mtr7g2979 7 46612141 46618968 ECH
Mtr7g2979 7 46612141 46618968 Mtr1g3140 1 42679459 42684393 PCT