Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2960 ATGGTAGAGGCTCCATTGAACTCTATTCTAAGAAGAAGAAGACAACATGTGAATATTCTTCAGGATGTTAGTGGAATAATAAAGCCTGGCAGGATGACATTGCTTCTGGGACCTCCAAGTTCTGGAAAGACCACACTTCTCTTGGCTTTGGCTGGCAAACTTGATCCCAAGCTAAAGTTTACTGGAAAAGTGAGTTATAATGGTCATGAGATGAAAGAATTTGTACCCCAAAGAACTGCTGCTTATGTCAGTCAAAATGATCTTCACCTTGGAGAATTGACTGCTGTTGCAACTGAAGGCCAGAAAGAAAATCTAGTAGTAGATTATATTCTAAAGGTTCTGGGATTGGAGATATGTGCAGATACTGTGGTGGGAAATGAAATGTTAAGAGGTATTTCTGGAGGACAAAGAAAACGTGTAACGACAGGGGAGATGCTGGTAGGACCAGCTAAGGCTCTTTTCATGGATGAAATATCTACTGGTTTGGATAGCTCGACAACTTTTCAAGTTGTGAGATCAGTGATGCATTATGTCCATCTTCTCAAAGGAACTGCTGTAATCTCACTCTTGCAGCCACCACCTGAGACTTACTATCTTTTCGACGACATTATTCTACTCTCTGAGGGGCATATTGTGTATCAAGGTCCCTGTGAGCATGTGCTCGATTTTTTTGCTTCAATGGGTTTCATATGCCATGCGAGGAAAGCTGTGGCAGACTTTTTACAAGAAGTGACATCTATGAAAGATCAGGAACAGTATTGGGCACAAAGAGATAAACCTTATAGATTTGTGACAGCTAAAGAGTTTGCAGAGGCATTTAAGTCATCTCATGTTGGGAAAAGCCTTGGTAATGATCTTGTTACTCAATTTGACAAGTCTAAAAGTCACCCAGCAGCTTTGACAACCAACAAGTATGGAATTGGAAACTGGGAATTATTCAAAGCTTGCTTATCAAGAGAATACTTACTCATGAAACGCAATTCGTTTTTATATATCTTCAAACTTTGCCAGATTGCTGTGGTGGCCACAATTACCATGACTGTTTTCCTCCGGACAGAAATGCACCATGACTCAGTGACCGATGGAAACATTTATGCGGGTGCAATGTTCTTTGGAAATATGATAATCATGTTTAATGGTCTTTCTGAACTTGACATGGCAGTCATAAATCTTCCTGTATTCTACAAGCAAAGAGGATATCTTTTCTTCCCTTCTTGGGCATATGCTCTCCCTTCATGGATTATAAAAATCCCCTTGACTATTTTGGAAGTGGCTGTATGGATATTCCTCACCTATTACTTCATTGGTTATGATCCTGAATTTGGAAGGTTTCTTAAGCAATTCCTTCTTATATCTTCTGTTAACCAAATGGGGTCTTCGCTATTCCGGTTCCTTGGGGCAGTTGGAAGAGACATGTCAGTAGCTTCAACACTAGGATCATTTACATTGGCTTTGCTGGTTGTCATGAGTGGTTTTTCCCTCTCAAAAGGTAGCTTTATGGTTTCAGATGATATAGAAAAAGGGTGGATATGGGGATACTGGATATCACCTATGATGTATGCACAAAATGCCGTAGTGAATAACGAGTTCTTAGGGAAGAGCTGGAGACATGTTCTTCCCAACTCGACGGATTCGCTAGGAGTTGAAATTTTGAAATCTCGAGGGTTCTTTACTCAGTCTTACTGGTATTGGATAGGTTTTGGAGCAATGATTGGATACACATTACTATTCAACTTTGGTTACCTACTTGCTCTCGCTTACTTGAACCGTGAGTTTGTTCAGAGTAATAACATTAATTTTTTGAACAAAGAAGAGCCTAAAGTTGTAAAATCAGACCATTCTCTAGACAATGAGGATAATAGTGGAAGAAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTGTGTCACCTTTGATGAAGTAACATATTCTGTAGACATGCCACAGGAAATGAGGAATCAAGGTGTCCATGAGGATAAGTTGGTTCTTTTGAAAGGTGTCAGTGGAATTTTTAGGCCTGGTGTTCTCACTGCTTTAATGGGCGTCACGGGTGCTGGAAAAACTACTTTGTTGGATGTGCTTTCTGGTAGAAAAACTGGTGGATATATTGGTGGGACCATCACAATTTCTGGATATCCTAAGAAGCAAGAAACATTTGCAAGAATTTCTGGATACTGTGAGCAAAATGATATCCACTCTCCTCATGTTACTGTATATGAATCTTTGCTCTATTCAGCATGGCTTCGATTGCCTTCGGAAATCGAGAAAGAAACAAGGAAGATGTTCATTGAGGAAGTCATGGAGCTTGTGGAGCTAAACCCGCTTAGGGATGCAATTGTCGGATTGCCAGGGGTTAGTGGTCTATCGACGGAGCAACGCAAAAGGTTGACAGTTGCAGTTGAGTTAGTGGCTAATCCTTCTATAATATTCATGGATGAGCCAACTTCGGGGCTAGATGCAAGGGCTGCATCTATTGTTATGAGAGCAGTTAGAAACATAGTGGACACAGGAAGAACAATTGTTTGTACCATTCATCAGCCCAGCATTCATATATTTGAATCTTTTGACGAGCTTTTCTTATTGAAGCAAGGAGGACAAGAGATATATGTGGGTCCACTTGGACACCATTCTTGTAATTTAATTAATTACTTTCAGAGAATTCAAGGTGTAGGTAACATTAAAGATGGATATAATCCAGCAACTTGGATTTTGGAAGTCACTACTTCATCTAAAGAATTAGAATTAGGGGTTGATTTTGCTGAGGTGTACATAAATTCAACATTATACAGGAGAAACAAAGCTCTTATTCAAGAATTGAGCACTCCAGCTCCTTTTTCAAATGAACTTTGTTTTCCTTCAAAGTACTCTAGGTCCTTCGCTGTCCAATTTATGACTTGTTTATGGAAACAACATTGGTCTTACTGGCGCAACCCTCTGTACAATGCCATAAGGTTTCTCTTCACAACCATTGTCGCTGTGTTGCTTGGCAGCATGTACCATAACTTTGGCTCCAAATATAAAAAGCAACAAGATTTATTTAATTCGATGGGCTTTATGTATACGGCTAGTATACTTATTGGTGTCAAGAATTGTTTCTCAGTACAACCGGTGGTAGATGTAGAGCGAGTAGTCCTTCACCGAGAAAGAGCAGCAGGAATGTATTCATCTATGGCATATGCTACTTCTCAGGCTCTAATTGAAATCCCTTATAATCTTGTTCAAGCTGTGGTTTATGGAATTATTGTTTATGCGATGATTGGTTACGAATGGAGTGCTACCAAGTTCTTTTGGTACATATTTTTCATGTTCTTCAACTTCCTCTACTTTACCTATCTTGGCATGATGACAGCAGCCATGACCCCAAACCTACCCATAGCCGGTTTAATTAGCGGTGCAACCATGACATCATGGAATCTCTTCTCAGGATTCCTAGTCCCACACCCCAGGATTCCTTTATGGTGGAGATGGTACAGTTGGTTGAATCCAGTAGCTTGGACTTTAAATGGATTGATGACTTCGCAGTTTGGAGATATAAAAAGCAATGTTGAGATTAGAGGAACAAGTGTTCCTGTACAAGACTATTTAAGAGACTACTTTGGTTTCAGACATGATTTTTTGGGAGTGGTTGCTATTATAGTTTTTGGTTTTACAATAGCTTTTGTATTGGTCTTTGCCATATCGATCAAGATATTTAATTTCCAACGACGTTAA 3711 0.3964 MVEAPLNSILRRRRQHVNILQDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLKFTGKVSYNGHEMKEFVPQRTAAYVSQNDLHLGELTAVATEGQKENLVVDYILKVLGLEICADTVVGNEMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQVVRSVMHYVHLLKGTAVISLLQPPPETYYLFDDIILLSEGHIVYQGPCEHVLDFFASMGFICHARKAVADFLQEVTSMKDQEQYWAQRDKPYRFVTAKEFAEAFKSSHVGKSLGNDLVTQFDKSKSHPAALTTNKYGIGNWELFKACLSREYLLMKRNSFLYIFKLCQIAVVATITMTVFLRTEMHHDSVTDGNIYAGAMFFGNMIIMFNGLSELDMAVINLPVFYKQRGYLFFPSWAYALPSWIIKIPLTILEVAVWIFLTYYFIGYDPEFGRFLKQFLLISSVNQMGSSLFRFLGAVGRDMSVASTLGSFTLALLVVMSGFSLSKGSFMVSDDIEKGWIWGYWISPMMYAQNAVVNNEFLGKSWRHVLPNSTDSLGVEILKSRGFFTQSYWYWIGFGAMIGYTLLFNFGYLLALAYLNREFVQSNNINFLNKEEPKVVKSDHSLDNEDNSGRKRGMVLPFEPHCVTFDEVTYSVDMPQEMRNQGVHEDKLVLLKGVSGIFRPGVLTALMGVTGAGKTTLLDVLSGRKTGGYIGGTITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPSEIEKETRKMFIEEVMELVELNPLRDAIVGLPGVSGLSTEQRKRLTVAVELVANPSIIFMDEPTSGLDARAASIVMRAVRNIVDTGRTIVCTIHQPSIHIFESFDELFLLKQGGQEIYVGPLGHHSCNLINYFQRIQGVGNIKDGYNPATWILEVTTSSKELELGVDFAEVYINSTLYRRNKALIQELSTPAPFSNELCFPSKYSRSFAVQFMTCLWKQHWSYWRNPLYNAIRFLFTTIVAVLLGSMYHNFGSKYKKQQDLFNSMGFMYTASILIGVKNCFSVQPVVDVERVVLHRERAAGMYSSMAYATSQALIEIPYNLVQAVVYGIIVYAMIGYEWSATKFFWYIFFMFFNFLYFTYLGMMTAAMTPNLPIAGLISGATMTSWNLFSGFLVPHPRIPLWWRWYSWLNPVAWTLNGLMTSQFGDIKSNVEIRGTSVPVQDYLRDYFGFRHDFLGVVAIIVFGFTIAFVLVFAISIKIFNFQRR* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2960 1236 Pfam ABC-2 type transporter 312 530 IPR013525 GO:0016020|GO:0140359
Mtr7g2960 1236 Pfam ABC-2 type transporter 962 1175 IPR013525 GO:0016020|GO:0140359
Mtr7g2960 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 866 IPR027417 -
Mtr7g2960 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 888 IPR003439 GO:0005524
Mtr7g2960 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 4 233 IPR003439 GO:0005524
Mtr7g2960 1236 CDD ABCG_PDR_domain1 1 215 IPR034001 -
Mtr7g2960 1236 SMART AAA_5 673 865 IPR003593 -
Mtr7g2960 1236 SMART AAA_5 29 210 IPR003593 -
Mtr7g2960 1236 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 94 1236 - -
Mtr7g2960 1236 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 95 - -
Mtr7g2960 1236 Pfam ABC-2 type transporter 191 270 IPR043926 GO:0140359
Mtr7g2960 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 245 IPR027417 -
Mtr7g2960 1236 Gene3D - 649 877 IPR027417 -
Mtr7g2960 1236 Pfam ABC transporter 20 158 IPR003439 GO:0005524
Mtr7g2960 1236 Pfam ABC transporter 664 816 IPR003439 GO:0005524
Mtr7g2960 1236 PANTHER ATP-BINDING CASSETTE TRANSPORTER 94 1236 - -
Mtr7g2960 1236 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 95 - -
Mtr7g2960 1236 CDD ABCG_PDR_domain2 633 871 IPR034003 -
Mtr7g2960 1236 Pfam Plant PDR ABC transporter associated 535 590 IPR013581 -
Mtr7g2960 1236 Gene3D - 8 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2960 Mtr-Chr7 46427961 46434471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2960 14 191 Calmodulin-binding Proteins AT2G36910 23.153 4.48e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2960 K08711 - gmx:732607 1823.14