Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2936 ATGGAAGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTTCCCAGCAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCCTAGAGGAGACATACCCCAGATTTTCTGATTCGCAGCCGACTTATGTGGAAAAAGATCTTAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCCAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATACTCAACCGATCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAGTGCTCATTTTATTTCACAGTCATTGAGTAACATGGCTTCCGTGCCATTACCGTATTCTTCAAATAATGGACCGGTACCTTCTACAACATCAACTCATTATTCCAATGGAAACAGTGCTTCATGGCATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAATTGATAATAACCAAGTAGAGAGTGGTGCCTGCAATATTATGGCCACCGAGGAATTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTCCAGCAGGACACCAATCTCAAGACCACCAACAACTTCCTGCTCTATCTGGAGAAAACCATGTTGGCGTCGCTCCATCTTCCTCAGCAAATTCTGCAACCACCAAGCCACGGATGCGTTGGACTCCTGAGCTTCACGAAGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGTTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGAGCTGGAGAGAAAAAATTAAGCCCCATTGAAGATATTTCATCTCTAGATTTGAAAACTGGTATTGAGATCACGGAAGCTCTACGACTGCAGATGGAGGTCCAGAAACGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTATCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAACCATTTAAGGCATCATCGTCAGCCATTGAGAATCCATCTGGAGTGTCTTCTGATACCATGAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAAGTCAGGACCTGATCAAGCTAATGGTAGTACCACGGTTGAGGAAAGCTCACTGGAAGCAGTTGAGAAGTTGGATACCTCCAAATCTCAACAAGCTTCTAAGGATCTTGAGCAAAATGAAAATGAAGATAGCCCTCAAGCCCCTAAGCGTCAAAGGACAGATGAGTGA 1470 0.4293 MEARPAFSIERSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLPYSSNNGPVPSTTSTHYSNGNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFPAGHQSQDHQQLPALSGENHVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSPTKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLEQNENEDSPQAPKRQRTDE* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2936 489 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Mtr7g2936 489 MobiDBLite consensus disorder prediction 469 489 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 30 47 - -
Mtr7g2936 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 319 IPR017930 -
Mtr7g2936 489 Coils Coil 350 370 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 8 22 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 217 237 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 84 103 - -
Mtr7g2936 489 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Mtr7g2936 489 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 60 489 IPR044848 GO:0003700
Mtr7g2936 489 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Mtr7g2936 489 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 60 489 - -
Mtr7g2936 489 Gene3D - 261 320 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 399 419 - -
Mtr7g2936 489 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 399 489 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 1 22 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 30 49 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 438 468 - -
Mtr7g2936 489 MobiDBLite consensus disorder prediction 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2936 Mtr-Chr7 46149994 46156644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2936 1 440 G2-like Transcription Factor Family AT4G28610 48.879 2.67e-111 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr7g2936 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2936 - - gmx:100810560 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2936 7 46149994 46156644 Mtr7g2936 7 46149994 46156644 ECH
Mtr7g2936 7 46149994 46156644 Mtr1g2841 1 39561843 39566158 PCT