Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2922 ATGGGGAGTAGGGATAAGCACCGGGGGAAGAGATTGCAGAAGATAATGAAGTGCTTTTGCTCAGGGGATATGGTTAAAGAAGAAGAAACAATGGTTCCTAATTCGTCAGAATCTCTTGCAACTAAGGATTATTTTTCTTCAACGGCAAGTGGGATTTCTGGCCAAGATGGACAAGTTGAGAGGAGGCTGGATTCTGGTAACATAGAACAAGCTGAATCGTCGTTGCGTGAGAGTGGTATCTTGAACTATGAGGAAGCTAGAGCTTTGTTAGGGAGATATGAATATCAGGAAGGAAATATAGAAGCCGCTTTGCATGTTTTTGAAGGCATAAACATAGCTGCTTTGACTCCTAAGATAAAAGTTTTCCTTGCCAAAAGCACAGAACGCCCCAAGAGACGCTCTCAGAATTACACTACTCCACCAATGTCTATACATACAGCTGGATTACTATTAGAGGCGATCTTTCTAAAGGCAAAATGTTTGCAGGTTCTTGCAAGGTTTGAAGAATCCGCCCAAACATGCAAAATTATTCTGGACTTGATTGAGTCTTCTTTACCGGAAGGCTTACCTGGAAACTTTGGTTCCGAATGTAAATTGCAGGAGACTCTAAGTAAGGCAGTTGAGCTACTTCCGGAATTATGGAAACTTGCTGATTGTCCACGTGAAGTTATTTTGTCTTATCGGAATGCACTCCTTCATCGATGGAATCTTGATGCAGGTACCACAGCAAAAATTCAGAAAGAATTTGCCATTTTTCTTCTATATAGTGGAGGGGAAGAAATTCCCTCAGATCTTCGTTCCCATATGGACAGTTCATTTGTACCAAGAAATAACATTGAAGAGGCTATACTTCTTTTAATGATTTTGCAAAGAAAAATCGCTCTAAATAAAATTGAGTCGGATCCTTCAATAATGGAGCACCTTTCATTTTCTCTATCGGTTTCCGGGGATCTGACAGCTTTAGCCAACCAATGGGAAGAGTTACTCCCTGTTACTATCAATCGAAGAGAAAGGTACCATGCCCTTGCTCTTTGTTATTATGGAGCAAATAAGGACTTGGTGGCACTTAATCTTCTTAAAAAGTTGTTGAGTAGCAGTGAGGATCCAAAACATGTTCCTGCTTTGTTAATGGCTTCTAAGATATGTTGTGAGAACCCTGACCTTGCAAAAGATGGGGTTAGCTATGCTTGCAGAGCGCGTGAGAACTTGTTTGAAAAATGTAATCAGTTGGAAAGTCTAGCCAATTGCTTACTTGGTGTTTCGCTTTCAACATACTCAAAATTTGCTGTTTCTAACTCTGAGAGGTTTGAGAGACAATCTGAGGCACTTCATTCACTAGAAACTGCAAGCACTATGACCAAAATGAAGGAACCTCTTATACTTTACTATTTAAGTTTAGAATGTGCAGAGCAAAGGAAGTTGGATTCTGCACTTTGTTATGCAGAACGCTTTCTAAGTTTAGAAGCTGGGTCTAATATTAGAGGCTGGTTATTGTTAGCCCGAATATTATCAGCACAAAAACAGTTTTTGGATGCTGAAGGTATTGTAGATGCTGCTTTGGATCGGACTGGAATATGGGATCAAGGAGATTTGTTGCGAACAAAAGCTAAACTGCAAATTGCACAGGAGAAGTTGCCAAGTGCTATTGAGACGTATACTCAGCTTCTTGGTATTCTTCTGGTTCAGAGAAAAACTTTTGGGTCAAGAACGAAGCTATATAAGGACAACAGAGATCATGCTAGGAACTTGGAAGTGGAAATATGGCATGATCTTGCTTATATATACATACGTCTATCGCGGTGGCATGATGCAGAAGCGTGTCTTTCAAAATCTAAGGCCATCAAACTACACTCTGCTTCTAGATGTCATGTAATAGGTACTATGCTCGAAGCCAAGGGTCTTTACAAAGAGGCTCTTAAAGCTTTTCGTGATGCTTTGGACCTTGATCCCGGACATATCCCTAGCTTGATCTCAACCGCTGTGGTTCTTAGACGGGACGGTACTCAATCAAATCCTGCTATTAGAAGCTATCTGATGGAAGCACTACGGCTTAACAGCTCTAATGCTTCTGCTTGGTATCATCTTGGTATTCTTCACAAGGCTGAAGGTAGAATGTCAGAAGCTGCCGAATGTTTTCAAGAAGCAAACTCTCTTGAAGAATCAGAACCAGTGGAACCTTTCAGATGA 2187 0.4079 MGSRDKHRGKRLQKIMKCFCSGDMVKEEETMVPNSSESLATKDYFSSTASGISGQDGQVERRLDSGNIEQAESSLRESGILNYEEARALLGRYEYQEGNIEAALHVFEGINIAALTPKIKVFLAKSTERPKRRSQNYTTPPMSIHTAGLLLEAIFLKAKCLQVLARFEESAQTCKIILDLIESSLPEGLPGNFGSECKLQETLSKAVELLPELWKLADCPREVILSYRNALLHRWNLDAGTTAKIQKEFAIFLLYSGGEEIPSDLRSHMDSSFVPRNNIEEAILLLMILQRKIALNKIESDPSIMEHLSFSLSVSGDLTALANQWEELLPVTINRRERYHALALCYYGANKDLVALNLLKKLLSSSEDPKHVPALLMASKICCENPDLAKDGVSYACRARENLFEKCNQLESLANCLLGVSLSTYSKFAVSNSERFERQSEALHSLETASTMTKMKEPLILYYLSLECAEQRKLDSALCYAERFLSLEAGSNIRGWLLLARILSAQKQFLDAEGIVDAALDRTGIWDQGDLLRTKAKLQIAQEKLPSAIETYTQLLGILLVQRKTFGSRTKLYKDNRDHARNLEVEIWHDLAYIYIRLSRWHDAEACLSKSKAIKLHSASRCHVIGTMLEAKGLYKEALKAFRDALDLDPGHIPSLISTAVVLRRDGTQSNPAIRSYLMEALRLNSSNASAWYHLGILHKAEGRMSEAAECFQEANSLEESEPVEPFR* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2922 728 Gene3D Tetratricopeptide repeat domain 581 725 IPR011990 GO:0005515
Mtr7g2922 728 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 8 728 - -
Mtr7g2922 728 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515
Mtr7g2922 728 ProSiteProfiles TPR repeat profile. 689 722 IPR019734 GO:0005515
Mtr7g2922 728 SUPERFAMILY TPR-like 531 719 IPR011990 GO:0005515
Mtr7g2922 728 SMART tpr_5 151 184 IPR019734 GO:0005515
Mtr7g2922 728 SMART tpr_5 619 652 IPR019734 GO:0005515
Mtr7g2922 728 SMART tpr_5 585 618 IPR019734 GO:0005515
Mtr7g2922 728 SMART tpr_5 689 722 IPR019734 GO:0005515
Mtr7g2922 728 SMART tpr_5 493 526 IPR019734 GO:0005515
Mtr7g2922 728 PANTHER PROTEIN NPG1 8 728 IPR043376 -
Mtr7g2922 728 Pfam Tetratricopeptide repeat 620 651 IPR019734 GO:0005515
Mtr7g2922 728 Pfam Tetratricopeptide repeat 689 720 IPR019734 GO:0005515
Mtr7g2922 728 SUPERFAMILY TPR-like 337 556 IPR011990 GO:0005515
Mtr7g2922 728 Gene3D Tetratricopeptide repeat domain 57 580 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2922 Mtr-Chr7 45997818 46004222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2922 10 728 Calmodulin-binding Proteins AT4G28600 54.223 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2922 K21843 - gmx:100809498 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2922 7 45997818 46004222 Mtr7g2922 7 45997818 46004222 ECH
Mtr1g2369 1 34215649 34219687 Mtr7g2922 7 45997818 46004222 PCT